Package: FeatSeekR 1.7.2

Tuemay Capraz

FeatSeekR: FeatSeekR an R package for unsupervised feature selection

FeatSeekR performs unsupervised feature selection using replicated measurements. It iteratively selects features with the highest reproducibility across replicates, after projecting out those dimensions from the data that are spanned by the previously selected features. The selected a set of features has a high replicate reproducibility and a high degree of uniqueness.

Authors:Tuemay Capraz [cre, aut]

FeatSeekR_1.7.2.tar.gz
FeatSeekR_1.7.2.zip(r-4.5)FeatSeekR_1.7.2.zip(r-4.4)FeatSeekR_1.7.2.zip(r-4.3)
FeatSeekR_1.7.2.tgz(r-4.5-any)FeatSeekR_1.7.2.tgz(r-4.4-any)FeatSeekR_1.7.2.tgz(r-4.3-any)
FeatSeekR_1.7.2.tar.gz(r-4.5-noble)FeatSeekR_1.7.2.tar.gz(r-4.4-noble)
FeatSeekR_1.7.2.tgz(r-4.4-emscripten)FeatSeekR_1.7.2.tgz(r-4.3-emscripten)
FeatSeekR.pdf |FeatSeekR.html✨
FeatSeekR/json (API)
NEWS

# Install 'FeatSeekR' in R:
install.packages('FeatSeekR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tcapraz/featseekr/issues

On BioConductor:FeatSeekR-1.7.2(bioc 3.21)FeatSeekR-1.6.0(bioc 3.20)

softwarestatisticalmethodfeatureextractionmassspectrometry

4.48 score 2 stars 3 scripts 153 downloads 4 exports 43 dependencies

Last updated 2 months agofrom:e4fd2d7320. Checks:3 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 18 2025
R-4.5-winNOTEMar 18 2025
R-4.5-macNOTEMar 18 2025
R-4.5-linuxNOTEMar 18 2025
R-4.4-winNOTEMar 18 2025
R-4.4-macNOTEMar 18 2025
R-4.4-linuxNOTEMar 18 2025
R-4.3-winOKMar 18 2025
R-4.3-macOKMar 18 2025

Exports:FeatSeekplotSelectedFeaturesplotVarianceExplainedsimData

Dependencies:abindaskpassBiobaseBiocGenericsclicolorspacecrayoncurlDelayedArrayfarvergenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesgluegtablehttrIRangesjsonlitelabelinglatticelifecycleMASSMatrixMatrixGenericsmatrixStatsmimemunsellopensslpheatmappracmaR6RColorBrewerrlangS4ArraysS4VectorsscalesSparseArraySummarizedExperimentsysUCSC.utilsviridisLiteXVector

FeatSeekR user guide

Tuemay Capraz

Rendered fromFeatSeekR-vignette.Rmdusingknitr::rmarkdownon Mar 18 2025.

Last update: 2025-01-28
Started: 2021-11-24