Package: FeatSeekR 1.7.2

Tuemay Capraz

FeatSeekR: FeatSeekR an R package for unsupervised feature selection

FeatSeekR performs unsupervised feature selection using replicated measurements. It iteratively selects features with the highest reproducibility across replicates, after projecting out those dimensions from the data that are spanned by the previously selected features. The selected a set of features has a high replicate reproducibility and a high degree of uniqueness.

Authors:Tuemay Capraz [cre, aut]

FeatSeekR_1.7.2.tar.gz
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FeatSeekR_1.7.2.tgz(r-4.5-any)FeatSeekR_1.7.2.tgz(r-4.4-any)FeatSeekR_1.7.2.tgz(r-4.3-any)
FeatSeekR_1.7.2.tar.gz(r-4.5-noble)FeatSeekR_1.7.2.tar.gz(r-4.4-noble)
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FeatSeekR.pdf |FeatSeekR.html✨
FeatSeekR/json (API)
NEWS

# Install 'FeatSeekR' in R:
install.packages('FeatSeekR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tcapraz/featseekr/issues

On BioConductor:FeatSeekR-1.7.2(bioc 3.21)FeatSeekR-1.6.0(bioc 3.20)

softwarestatisticalmethodfeatureextractionmassspectrometry

4.48 score 2 stars 3 scripts 153 downloads 4 exports 43 dependencies

Last updated 23 days agofrom:e4fd2d7320. Checks:3 OK, 4 NOTE, 1 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 16 2025
R-4.5-winNOTEFeb 16 2025
R-4.5-macWARNINGFeb 16 2025
R-4.5-linuxNOTEFeb 16 2025
R-4.4-winNOTEFeb 16 2025
R-4.4-macNOTEFeb 16 2025
R-4.3-winOKFeb 16 2025
R-4.3-macOKFeb 16 2025

Exports:FeatSeekplotSelectedFeaturesplotVarianceExplainedsimData

Dependencies:abindaskpassBiobaseBiocGenericsclicolorspacecrayoncurlDelayedArrayfarvergenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesgluegtablehttrIRangesjsonlitelabelinglatticelifecycleMASSMatrixMatrixGenericsmatrixStatsmimemunsellopensslpheatmappracmaR6RColorBrewerrlangS4ArraysS4VectorsscalesSparseArraySummarizedExperimentsysUCSC.utilsviridisLiteXVector

FeatSeekR user guide

Tuemay Capraz

Rendered fromFeatSeekR-vignette.Rmdusingknitr::rmarkdownon Feb 16 2025.

Last update: 2025-01-28
Started: 2021-11-24