Package: FISHalyseR 1.39.0

Karesh Arunakirinathan

FISHalyseR: FISHalyseR a package for automated FISH quantification

FISHalyseR provides functionality to process and analyse digital cell culture images, in particular to quantify FISH probes within nuclei. Furthermore, it extract the spatial location of each nucleus as well as each probe enabling spatial co-localisation analysis.

Authors:Karesh Arunakirinathan <[email protected]>, Andreas Heindl <[email protected]>

FISHalyseR_1.39.0.tar.gz
FISHalyseR_1.39.0.zip(r-4.5)FISHalyseR_1.39.0.zip(r-4.4)FISHalyseR_1.39.0.zip(r-4.3)
FISHalyseR_1.39.0.tgz(r-4.4-any)FISHalyseR_1.39.0.tgz(r-4.3-any)
FISHalyseR_1.39.0.tar.gz(r-4.5-noble)FISHalyseR_1.39.0.tar.gz(r-4.4-noble)
FISHalyseR_1.39.0.tgz(r-4.4-emscripten)FISHalyseR_1.39.0.tgz(r-4.3-emscripten)
FISHalyseR.pdf |FISHalyseR.html✨
FISHalyseR/json (API)
NEWS

Peer review:

On BioConductor:FISHalyseR-1.39.0(bioc 3.20)FISHalyseR-1.38.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 0.82 score 38 dependencies

Last updated 2 months agofrom:f17941c670

Exports:analyseParticlescalculateMaxEntropycalculateThresholdcomputeIlluminationCorrectionprocessFISH

Dependencies:abindbase64encBiocGenericsbitopsbslibcachemclidigestEBImageevaluatefastmapfftwtoolsfontawesomefsgluehighrhtmltoolshtmlwidgetsjpegjquerylibjsonliteknitrlatticelifecyclelocfitmemoisemimepngR6rappdirsRCurlrlangrmarkdownsasstifftinytexxfunyaml