Package: DEGseq 1.61.0

Likun Wang

DEGseq: Identify Differentially Expressed Genes from RNA-seq data

DEGseq is an R package to identify differentially expressed genes from RNA-Seq data.

Authors:Likun Wang <[email protected]>, Xiaowo Wang <[email protected]> and Xuegong Zhang <[email protected]>.

DEGseq_1.61.0.tar.gz
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DEGseq.pdf |DEGseq.html✨
DEGseq/json (API)
NEWS

# Install 'DEGseq' in R:
install.packages('DEGseq', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • c++– GNU Standard C++ Library v3

On BioConductor:DEGseq-1.59.0(bioc 3.20)DEGseq-1.58.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

rnaseqpreprocessinggeneexpressiondifferentialexpressionimmunooncology

4.16 score 48 scripts 332 downloads 5 exports 34 dependencies

Last updated 23 days agofrom:8770bb20fb. Checks:OK: 1 NOTE: 4 WARNING: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 30 2024
R-4.5-win-x86_64NOTEOct 30 2024
R-4.5-linux-x86_64NOTEOct 30 2024
R-4.4-win-x86_64NOTEOct 30 2024
R-4.4-mac-x86_64WARNINGOct 30 2024
R-4.4-mac-aarch64WARNINGOct 30 2024
R-4.3-win-x86_64NOTEOct 30 2024
R-4.3-mac-x86_64WARNINGOct 30 2024
R-4.3-mac-aarch64WARNINGOct 30 2024

Exports:DEGexpDEGexp2DEGseqgetGeneExpreadGeneExp

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrqvalueR6RColorBrewerRcppreshape2rlangscalesstringistringrtibbleutf8vctrsviridisLitewithr

DEGseq

Rendered fromDEGseq.Rnwusingutils::Sweaveon Oct 30 2024.

Last update: 2023-11-07
Started: 2013-11-01