Package: DAssemble 0.99.4

Nalin Arora

DAssemble: Ensemble Models for Differential Analysis

The DAssemble package implements an ensemble framework for differential-abundance and differential-expression analysis across bulk RNA-seq, single-cell RNA-seq, and microbiome studies. It wraps a collection of popular DA/DE methods as core methods and combines them via Cauchy Combination Tests (CCT), optionally augmented by simple enhancers such as Wilcoxon, Kolmogorov–Smirnov, and presence–absence logistic regression.

Authors:Ziyu Liu [aut], Nalin Arora [aut, cre], Chuxuan Gao [aut], Himel Mallick [aut]

DAssemble_0.99.4.tar.gz
DAssemble_0.99.4.zip(r-4.7-any)DAssemble_0.99.4.zip(r-4.6-any)DAssemble_0.99.4.zip(r-4.5-any)
DAssemble_0.99.4.tgz(r-4.6-any)DAssemble_0.99.4.tgz(r-4.5-any)
DAssemble_0.99.4.tar.gz(r-4.7-any)DAssemble_0.99.4.tar.gz(r-4.6-any)
DAssemble_0.99.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
DAssemble/json (API)

# Install 'DAssemble' in R:

install.packages('DAssemble', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/himelmallick/dassemble/issues

On BioConductor:DAssemble-0.99.4(bioc 3.24)

software statisticalmethod differentialexpression rnaseq singlecell microbiome normalization regression

5.48 score 6 stars 3 scripts 593 downloads 1 exports 38 dependencies

Last updated from:ca195c8a7b. Checks:1 NOTE, 9 OK. Indexed: yes.

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bioc-checks	NOTE	226
linux-devel	OK	311
source / vignettes	OK	282
linux-release	OK	304
macos-release	OK	203
macos-oldrel	OK	111
windows-devel	OK	207
windows-release	OK	167
windows-oldrel	OK	180
wasm-release	OK	191