Package: CompensAID 1.1.0

Rosan Olsman

CompensAID: Automated detection tool for spillover errors

The CompensAID is an automated quality control tool, which determines for each marker combination in the FCS file, whether there a potential presence of reference errors. Such reference errors, which represent themselves in the form of skewed populations, are detected by integrating the Secondary Stain Index (SSI) score. Marker combinations with an SSI < 1 are flagged by CompensAID.

Authors:Rosan Olsman [aut, cre], Sarah Bonte [aut], Mattias Hofmans [aut], Malicorne Buysse [aut], Katrien Van der Borght [aut], Yvan Saeys [aut], Vincent van der Velden [aut], Sofie Van Gassen [aut]

CompensAID_1.1.0.tar.gz
CompensAID_1.1.0.zip(r-4.7)CompensAID_1.1.0.zip(r-4.6)CompensAID_1.1.0.zip(r-4.5)
CompensAID_1.1.0.tgz(r-4.6-any)CompensAID_1.1.0.tgz(r-4.5-any)
CompensAID_1.1.0.tar.gz(r-4.7-any)CompensAID_1.1.0.tar.gz(r-4.6-any)
CompensAID_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CompensAID/json (API)

# Install 'CompensAID' in R:

install.packages('CompensAID', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/olsman/compensaid/issues

On BioConductor:CompensAID-1.1.0(bioc 3.24)CompensAID-1.0.0(bioc 3.23)

flowcytometry qualitycontrol preprocessing

5.26 score 6 stars 1 scripts 3 exports 119 dependencies

Last updated from:ba6a084a71. Checks:1 NOTE, 9 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	202
linux-devel-x86_64	OK	317
source / vignettes	OK	265
linux-release-x86_64	OK	333
macos-release-arm64	OK	194
macos-oldrel-arm64	OK	132
windows-devel	OK	202
windows-release	OK	161
windows-oldrel	OK	179
wasm-release	OK	195