Package: ComPrAn 1.21.0

Petra Palenikova

ComPrAn: Complexome Profiling Analysis package

This package is for analysis of SILAC labeled complexome profiling data. It uses peptide table in tab-delimited format as an input and produces ready-to-use tables and plots.

Authors:Rick Scavetta [aut], Petra Palenikova [aut, cre]

ComPrAn_1.21.0.tar.gz
ComPrAn_1.21.0.zip(r-4.7)ComPrAn_1.21.0.zip(r-4.6)ComPrAn_1.21.0.zip(r-4.5)
ComPrAn_1.21.0.tgz(r-4.6-any)ComPrAn_1.21.0.tgz(r-4.5-any)
ComPrAn_1.21.0.tar.gz(r-4.7-any)ComPrAn_1.21.0.tar.gz(r-4.6-any)
ComPrAn_1.21.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ComPrAn/json (API)
NEWS

# Install 'ComPrAn' in R:
install.packages('ComPrAn', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:ComPrAn-1.21.0(bioc 3.24)ComPrAn-1.20.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

massspectrometryproteomicsvisualization

4.48 score 6 scripts 278 downloads 19 exports 93 dependencies

Last updated from:cd4d3ebded. Checks:1 WARNING, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING175
linux-devel-x86_64OK218
source / vignettesOK218
linux-release-x86_64OK237
macos-release-arm64OK122
macos-oldrel-arm64OK123
windows-develOK129
windows-releaseOK120
windows-oldrelOK121
wasm-releaseOK130

Exports:allPeptidesPlotassignClusterscleanDataclusterCompcompranAppexportClusterAssignmentsgetNormTablegroupHeatMapmakeBarPlotClusterSummaryoneGroupTwoLabelsCoMigrationonlyInOneLabelStatepeptideImportpickPeptideproteinPlotprotImportForAnalysissimplifyProteinssplitModLabtoFiltertwoGroupsWithinLabelCoMigration

Dependencies:base64encbitbit64bslibcachemcellrangerclicliprcommonmarkcpp11crayoncrosstalkcurldata.tabledigestdplyrDTevaluatefarverfastmapfontawesomeforcatsforeignformatRfsfutile.loggerfutile.optionsgenericsggplot2gluegtablehavenhighrhmshtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglambda.rlaterlazyevallifecyclemagrittrmemoisemimeotelpillarpkgconfigprettyunitsprogresspromisespurrrR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppreadrreadxlrematchriorlangrmarkdownS7sassscalesshinyshinydashboardshinyjssourcetoolsstringistringrtibbletidyrtidyselecttinytextzdbutf8vctrsVennDiagramviridisLitevroomwithrwritexlxfunxtableyaml

Input File Description

Petra Palenikova & Rick Scavetta

Rendered fromfileFormats.rmdusingknitr::rmarkdownon May 26 2026.

Last update: 2020-12-23
Started: 2019-08-14

Protein workflow

Petra Palenikova & Rick Scavetta

Rendered fromproteinWorkflow.Rmdusingknitr::rmarkdownon May 26 2026.

Last update: 2021-01-26
Started: 2019-08-14

SILAC complexomics

Petra Palenikova & Rick Scavetta

Rendered fromSILACcomplexomics.Rmdusingknitr::rmarkdownon May 26 2026.

Last update: 2021-01-26
Started: 2019-08-13