Package: CoCiteStats 1.85.0
CoCiteStats: Different test statistics based on co-citation.
A collection of software tools for dealing with co-citation data.
Authors:
CoCiteStats_1.85.0.tar.gz
CoCiteStats_1.85.0.zip(r-4.7)CoCiteStats_1.85.0.zip(r-4.6)CoCiteStats_1.85.0.zip(r-4.5)
CoCiteStats_1.85.0.tgz(r-4.6-any)CoCiteStats_1.85.0.tgz(r-4.5-any)
CoCiteStats_1.85.0.tar.gz(r-4.7-any)CoCiteStats_1.85.0.tar.gz(r-4.6-any)
CoCiteStats_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CoCiteStats/json (API)
| # Install 'CoCiteStats' in R: |
| install.packages('CoCiteStats', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:CoCiteStats-1.85.0(bioc 3.24)CoCiteStats-1.84.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:b2bd0e448b. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 149 | ||
| linux-devel-x86_64 | NOTE | 377 | ||
| source / vignettes | OK | 176 | ||
| linux-release-x86_64 | NOTE | 349 | ||
| macos-release-arm64 | NOTE | 225 | ||
| macos-oldrel-arm64 | NOTE | 252 | ||
| windows-devel | NOTE | 246 | ||
| windows-release | NOTE | 266 | ||
| windows-oldrel | NOTE | 245 | ||
| wasm-release | OK | 130 |
Exports:actorAdjTablegene.gene.statisticgene.geneslist.siggene.geneslist.statisticpaperLentwowayTabletwTStats
Dependencies:AnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgenericsgluehttrIRangesjsonliteKEGGRESTlifecyclememoisemimeopensslorg.Hs.eg.dbpkgconfigpngR6rlangRSQLiteS4VectorsSeqinfosysvctrsXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Compute actor size adjustment on a two way table | actorAdjTable |
| Compute gene-gene statistics | gene.gene.statistic |
| Compute 3 two-way table statistics and p-values, with 4 different adjustments, for PubMed co-citation | gene.geneslist.sig |
| A function to compute association measures between a gene of interest and a list of genes. | gene.geneslist.statistic |
| Find the number of papers cited | paperLen |
| Compute a two way co-citation table for 2 genes. | twowayTable |
| Computes 3 two way table statistics. | twTStats |
