Package: CiteFuse 1.25.0

Introduction | Detecting both cross- and within-sample doublets using CiteFuse | HTO Normalisation and Visualisation | Doublet identification step 1: cross-sample doublet detection | Doublet identification step 1: within-sample doublet detection | Clustering | Performing SNF | Performing spectral clustering | Visualisation | Louvain clustering | Differential Expression Analysis | Exploration of feature expression | Perform DE Analysis with Wilcoxon Rank Sum test | For RNA expression | For ADT count | Visualising DE Results | circlepackPlot | DEcomparisonPlot | ADT Importance Evaluation | Gene - ADT network | RNA Ligand - ADT Receptor Analysis | Between-sample analysis | Read data from 10X Genomics | SessionInfo