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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CiteFuse" in publications use:'
type: software
license: GPL-3.0-only
title: 'CiteFuse: CiteFuse: multi-modal analysis of CITE-seq data'
version: 1.17.0
abstract: CiteFuse pacakage implements a suite of methods and tools for CITE-seq data
  from pre-processing to integrative analytics, including doublet detection, network-based
  modality integration, cell type clustering, differential RNA and protein expression
  analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive
  web-based visualisation of the analyses.
authors:
- family-names: Lin
  given-names: Yingxin
  email: yingxin.lin@sydney.edu.au
- family-names: Kim
  given-names: Hani
  email: jieun.kim@sydney.edu.au
preferred-citation:
  type: article
  title: CiteFuse enables multi-modal analysis of CITE-seq data
  authors:
  - family-names: Kim
    given-names: Hani Jieun
  - family-names: Lin
    given-names: Yingxin
    email: yingxin.lin@sydney.edu.au
  - family-names: Geddes
    given-names: Thomas A.
  - family-names: Yang
    given-names: Pengyi
  - family-names: Yang
    given-names: Jean Yee Hwa
  journal: Bioinformatics
  year: '2020'
  volume: '36'
  issue: '14'
  url: https://doi.org/10.1093/bioinformatics/btaa282
  start: '4137'
  end: '4143'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/SydneyBioX/CiteFuse
url: https://github.com/SydneyBioX/CiteFuse
contact:
- family-names: Lin
  given-names: Yingxin
  email: yingxin.lin@sydney.edu.au