Package: CCPROMISE 1.39.0

Xueyuan Cao

CCPROMISE: PROMISE analysis with Canonical Correlation for Two Forms of High Dimensional Genetic Data

Perform Canonical correlation between two forms of high demensional genetic data, and associate the first compoent of each form of data with a specific biologically interesting pattern of associations with multiple endpoints. A probe level analysis is also implemented.

Authors:Xueyuan Cao <[email protected]> and Stanley.pounds <[email protected]>

CCPROMISE_1.39.0.tar.gz
CCPROMISE_1.39.0.zip(r-4.7)CCPROMISE_1.39.0.zip(r-4.6)CCPROMISE_1.39.0.zip(r-4.5)
CCPROMISE_1.39.0.tgz(r-4.6-any)CCPROMISE_1.39.0.tgz(r-4.5-any)
CCPROMISE_1.39.0.tar.gz(r-4.7-any)CCPROMISE_1.39.0.tar.gz(r-4.6-any)
CCPROMISE_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CCPROMISE/json (API)

# Install 'CCPROMISE' in R:
install.packages('CCPROMISE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • exmplESet - Example of Conceptual Expression Set
  • exmplGeneSet - Example of Conceptual Gene Annotation
  • exmplMSet - Example of Conceptual Methylation Set
  • exmplPat - Example of Conceptual Phenotype Pattern Definition Set

On BioConductor:CCPROMISE-1.39.0(bioc 3.24)CCPROMISE-1.38.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarraygeneexpression

3.30 score 3 scripts 400 downloads 5 exports 42 dependencies

Last updated from:f503800072. Checks:1 ERROR, 7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR139
linux-devel-x86_64WARNING268
source / vignettesOK230
linux-release-x86_64WARNING262
macos-release-arm64WARNING159
macos-oldrel-arm64WARNING175
windows-develWARNING169
windows-releaseWARNING172
windows-oldrelWARNING188
wasm-releaseOK108

Exports:CANNCCPROMISEPrbCorPrbPROMISEPROMISE2

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemCCPclicpp11crayoncurlDBIfastmapgenericsgluegraphGSEABasehttrIRangesjsonliteKEGGRESTlifecyclememoisemimeopensslpkgconfigpngPROMISER6rlangRSQLiteS4VectorsSeqinfosysvctrsXMLxtableXVector

An introduction to CCPROMISE

Rendered fromCCPROMISE.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2016-10-16
Started: 2016-10-16