Package: BiocCheck 1.49.12

Marcel Ramos

BiocCheck: Bioconductor-specific package checks

BiocCheck guides maintainers through Bioconductor best practicies. It runs Bioconductor-specific package checks by searching through package code, examples, and vignettes. Maintainers are required to address all errors, warnings, and most notes produced.

Authors:Bioconductor Package Maintainer [aut], Lori Shepherd [aut], Daniel von Twisk [ctb], Kevin Rue [ctb], Marcel Ramos [aut, cre], Leonardo Collado-Torres [ctb], Federico Marini [ctb]

BiocCheck_1.49.12.tar.gz
BiocCheck_1.49.12.zip(r-4.7)BiocCheck_1.49.12.zip(r-4.6)BiocCheck_1.49.12.zip(r-4.5)
BiocCheck_1.49.12.tgz(r-4.6-any)BiocCheck_1.49.12.tgz(r-4.5-any)
BiocCheck_1.49.12.tar.gz(r-4.7-any)BiocCheck_1.49.12.tar.gz(r-4.6-any)
BiocCheck_1.49.12.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
BiocCheck/json (API)
NEWS

# Install 'BiocCheck' in R:
install.packages('BiocCheck', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/bioccheck/issues

On BioConductor:BiocCheck-1.49.7(bioc 3.24)BiocCheck-1.48.0(bioc 3.23)

infrastructurebioconductor-packagecore-services

10.22 score 10 stars 6 packages 133 scripts 3.3k downloads 4 exports 66 dependencies

Last updated from:5335ba2460. Checks:1 FAIL, 1 ERROR, 2 OK, 6 NOTE. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksFAIL1444
linux-devel-x86_64ERROR446
source / vignettesOK259
linux-release-x86_64NOTE415
macos-release-arm64NOTE279
macos-oldrel-arm64NOTE289
windows-develNOTE306
windows-releaseNOTE298
windows-oldrelNOTE281
wasm-releaseOK150

Exports:.BiocCheck.BiocPackageBiocCheckBiocCheckGitClone

Dependencies:askpassBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerbiocViewsbitbit64bitopsblobcachemcallrclicodetoolscommonmarkcpp11curlDBIdbplyrdplyrevaluatefastmapfilelockgenericsgluegraphhighrhttrhttr2jsonliteknitrlifecyclemagrittrmemoisemimeopensslpillarpkgconfigprocessxpspurrrR6rappdirsRBGLRCurlrlangRSQLiteRUnitrvestselectrstringdiststringistringrsystibbletidyrtidyselectutf8vctrswithrxfunXMLxml2yaml

BiocCheck: Ensuring Bioconductor package guidelines

Rendered fromBiocCheck.Rmdusingknitr::rmarkdownon Jun 02 2026.

Last update: 2026-05-30
Started: 2014-01-21