Package: BiocBaseUtils 1.9.0

Marcel Ramos

BiocBaseUtils: General utility functions for developing Bioconductor packages

The package provides utility functions related to package development. These include functions that replace slots, and selectors for show methods. It aims to coalesce the various helper functions often re-used throughout the Bioconductor ecosystem.

Authors:Marcel Ramos [aut, cre], Martin Morgan [ctb], Hervé Pagès [ctb]

BiocBaseUtils_1.9.0.tar.gz
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BiocBaseUtils.pdf |BiocBaseUtils.html✨
BiocBaseUtils/json (API)
NEWS

# Install 'BiocBaseUtils' in R:
install.packages('BiocBaseUtils', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/biocbaseutils/issues

On BioConductor:BiocBaseUtils-1.9.0(bioc 3.21)BiocBaseUtils-1.8.0(bioc 3.20)

softwareinfrastructurebioconductor-packagecore-package

8.78 score 4 stars 158 packages 3 scripts 11k downloads 12 exports 0 dependencies

Last updated 4 months agofrom:d643df4e5d. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 16 2025
R-4.5-winNOTEFeb 16 2025
R-4.5-macNOTEFeb 16 2025
R-4.5-linuxNOTEFeb 16 2025
R-4.4-winNOTEFeb 16 2025
R-4.4-macNOTEFeb 16 2025
R-4.3-winNOTEFeb 16 2025
R-4.3-macNOTEFeb 16 2025

Exports:askUserYesNocheckInstalledisCharacterisScalarCharacterisScalarIntegerisScalarLogicalisScalarNumberisTRUEorFALSEisZeroOneCharacterlifeCycleselectSomesetSlots

Dependencies:

BiocBaseUtils Quick Start

Bioconductor Core Team

Rendered fromBiocBaseUtils.Rmdusingknitr::rmarkdownon Feb 16 2025.

Last update: 2022-08-18
Started: 2022-08-18

Readme and manuals

Help Manual

Help pageTopics
BiocBaseUtils: Utility and Internal functions for Bioconductor packagesBiocBaseUtils-package BiocBaseUtils
Ask user for a yes/no responseaskUserYesNo
Suite of helper functions to test for typesAssertions isCharacter isScalarCharacter isScalarInteger isScalarLogical isScalarNumber isTRUEorFALSE isZeroOneCharacter
Check packages are installed otherwise suggestcheckInstalled
Set the life cycle stage of a functionlifeCycle
Select and return only some entries from a vectorselectSome
Convenience function to set slot valuesreplaceSlots setSlots