Package: BiocAzul 1.1.3

Marcel Ramos

BiocAzul: Programmatic Access to the Azul API

Represents the OpenAPI v2 Azul API as an R object for performing requests. The infrastructure uses the AnVIL and rapiclient packages. Users can connect to either the AnVIL or Human Cell Atlas Data Explorers.

Authors:Marcel Ramos [aut, cre], NHGRI AnVIL Project [fnd]

BiocAzul_1.1.3.tar.gz
BiocAzul_1.1.3.zip(r-4.7)BiocAzul_1.1.3.zip(r-4.6)BiocAzul_1.1.3.zip(r-4.5)
BiocAzul_1.1.3.tgz(r-4.6-any)BiocAzul_1.1.3.tgz(r-4.5-any)
BiocAzul_1.1.3.tar.gz(r-4.7-any)BiocAzul_1.1.3.tar.gz(r-4.6-any)
BiocAzul_1.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BiocAzul/json (API)

# Install 'BiocAzul' in R:

install.packages('BiocAzul', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/biocazul/issues

On BioConductor:BiocAzul-1.1.3(bioc 3.24)BiocAzul-1.0.3(bioc 3.23)

software infrastructure dataimport thirdpartyclient u24hg010263

4.70 score 2 scripts 150 downloads 8 exports 86 dependencies

Last updated from:06bf71fb25. Checks:1 NOTE, 8 OK, 1 ERROR. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	145
linux-devel-x86_64	OK	208
source / vignettes	OK	216
linux-release-x86_64	ERROR	174
macos-release-arm64	OK	123
macos-oldrel-arm64	OK	103
windows-devel	OK	108
windows-release	OK	101
windows-oldrel	OK	91
wasm-release	OK	132

Exports:availableFacets Azul facetTable importToTerra listCatalogs makeFilter operations projectTable

Dependencies:AnVIL AnVILBase AnVILGCP AnVILPublish askpass base64enc BiocBaseUtils BiocManager bit bit64 bslib cachem cli clipr commonmark cpp11 crayon crosstalk curl digest dplyr DT evaluate fastmap filelock fontawesome formatR fs futile.logger futile.options GCPtools generics glue highr hms htmltools htmlwidgets httpuv httr httr2 jquerylib jsonlite keyring knitr lambda.r later lazyeval lifecycle magrittr memoise mime miniUI openssl otel pillar pkgconfig prettyunits progress promises purrr R6 rapiclient rappdirs Rcpp readr rlang rmarkdown sass shiny sourcetools stringi stringr sys tibble tidyr tidyselect tinytex tzdb utf8 vctrs vroom whisker withr xfun xtable yaml

Introduction to the BiocAzul package

Rendered fromBiocAzul.Rmdusingknitr::rmarkdown

Last update: 2026-05-03
Started: 2026-03-04

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
The R Interface to the Human Cell Atlas Data Portal	.Azul Azul Azul-class operations,Azul-method
Obtain a list of projects and their IDs from the specified catalog	availableFacets Azul-utils facetTable listCatalogs projectTable
Import Data from the Human Cell Atlas Data Portal or the AnVIL Data Repository to a Terra Workspace	importToTerra
Convert a formula to a filter list	makeFilter