Package: BRAIN 1.53.0

Piotr Dittwald

BRAIN: Baffling Recursive Algorithm for Isotope distributioN calculations

Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.

Authors:Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen

BRAIN_1.53.0.tar.gz
BRAIN_1.53.0.zip(r-4.5)BRAIN_1.53.0.zip(r-4.4)BRAIN_1.53.0.zip(r-4.3)
BRAIN_1.53.0.tgz(r-4.4-any)BRAIN_1.53.0.tgz(r-4.3-any)
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BRAIN.pdf |BRAIN.html
BRAIN/json (API)

# Install 'BRAIN' in R:
install.packages('BRAIN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:BRAIN-1.53.0(bioc 3.21)BRAIN-1.52.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologymassspectrometryproteomics

5.11 score 13 scripts 328 downloads 10 mentions 7 exports 21 dependencies

Last updated 3 months agofrom:e298262631. Checks:1 OK, 6 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKDec 24 2024
R-4.5-winWARNINGDec 31 2024
R-4.5-linuxWARNINGDec 24 2024
R-4.4-winWARNINGDec 31 2024
R-4.4-macWARNINGDec 24 2024
R-4.3-winWARNINGDec 31 2024
R-4.3-macWARNINGDec 24 2024

Exports:calculateAverageMasscalculateIsotopicProbabilitiescalculateMonoisotopicMasscalculateNrPeaksgetAtomsFromSequseBRAINuseBRAIN2

Dependencies:askpassBiocGenericsBiostringscrayoncurlgenericsGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitelatticemimeopensslPolynomFR6RcppS4VectorssysUCSC.utilsXVector

BRAIN Usage

Rendered fromBRAIN-vignette.Rnwusingutils::Sweaveon Dec 24 2024.

Last update: 2018-08-08
Started: 2018-08-02