Introduction | Out-of-sync objects | The updateObject() generic function | A tedious process | updateBiocPackageRepoObjects() | List of tools provided by the updateObject package | Session information
Package: updateObject 1.17.0
Hervé Pagès
updateObject: Find/fix old serialized S4 instances
A set of tools built around updateObject() to work with old serialized S4 instances. The package is primarily useful to package maintainers who want to update the serialized S4 instances included in their package. This is still work-in-progress.
Authors:
updateObject_1.17.0.tar.gz
updateObject_1.17.0.zip(r-4.7)updateObject_1.17.0.zip(r-4.6)updateObject_1.17.0.zip(r-4.5)
updateObject_1.17.0.tgz(r-4.6-any)updateObject_1.17.0.tgz(r-4.5-any)
updateObject_1.17.0.tar.gz(r-4.7-any)updateObject_1.17.0.tar.gz(r-4.6-any)
updateObject_1.17.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
updateObject/json (API)
| # Install 'updateObject' in R: |
| install.packages('updateObject', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bioconductor/updateobject/issues
On BioConductor:updateObject-1.17.0(bioc 3.24)updateObject-1.16.0(bioc 3.23)
infrastructuredatarepresentationbioconductor-packagecore-package
Last updated from:c68a4cca09. Checks:1 WARNING, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 173 | ||
| linux-devel-x86_64 | OK | 805 | ||
| source / vignettes | OK | 233 | ||
| linux-release-x86_64 | OK | 274 | ||
| macos-release-arm64 | OK | 115 | ||
| macos-oldrel-arm64 | OK | 104 | ||
| windows-devel | OK | 153 | ||
| windows-release | OK | 135 | ||
| windows-oldrel | OK | 121 | ||
| wasm-release | OK | 140 |
Exports:bump_pkg_versioncollect_rda_filescollect_rds_filesgit_commitprepare_git_repo_for_workset_git_user_emailset_git_user_nameunset_git_user_emailunset_git_user_nameupdate_rda_fileupdate_rds_fileupdateAllBiocPackageRepoObjectsupdateAllPackageObjectsupdateBiocPackageRepoObjectsupdatePackageObjectsupdateSerializedObjects
Dependencies:BiocGenericsdigestgenericsS4Vectors
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bump the version of a package | bump_pkg_version |
| Convenience Git-related utility functions used by updateBiocPackageRepoObjects() | git-utils git_commit prepare_git_repo_for_work set_git_user_email set_git_user_name unset_git_user_email unset_git_user_name |
| Update the serialized objects contained in a Bioconductor package Git repository or in a set of Bioconductor package Git repositories | updateAllBiocPackageRepoObjects updateBiocPackageRepoObjects |
| Update the serialized objects contained in a package or in a set of packages | updateAllPackageObjects updatePackageObjects |
| Update the serialized objects contained in a directory | collect_rda_files collect_rds_files updateSerializedObjects update_rda_file update_rds_file |
