Package: tracktables 1.47.0

Tom Carroll

tracktables: Build IGV tracks and HTML reports

Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.

Authors:Tom Carroll, Sanjay Khadayate, Anne Pajon, Ziwei Liang

tracktables_1.47.0.tar.gz
tracktables_1.47.0.zip(r-4.7)tracktables_1.47.0.zip(r-4.6)tracktables_1.47.0.zip(r-4.5)
tracktables_1.47.0.tgz(r-4.6-any)tracktables_1.47.0.tgz(r-4.5-any)
tracktables_1.47.0.tar.gz(r-4.7-any)tracktables_1.47.0.tar.gz(r-4.6-any)
tracktables_1.47.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
tracktables/json (API)
NEWS

# Install 'tracktables' in R:
install.packages('tracktables', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:tracktables-1.47.0(bioc 3.24)tracktables-1.46.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

sequencingreportwriting

3.98 score 48 scripts 634 downloads 6 exports 37 dependencies

Last updated from:f26e8b5b67. Checks:1 ERROR, 7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR176
linux-devel-x86_64WARNING249
source / vignettesOK225
linux-release-x86_64WARNING228
macos-release-arm64WARNING131
macos-oldrel-arm64WARNING134
windows-develWARNING173
windows-releaseWARNING161
windows-oldrelWARNING222
wasm-releaseOK133

Exports:igvParammakebedtableMakeIGVSampleMetadataMakeIGVSessionMakeIGVSessionXMLmaketracktable

Dependencies:BHBiocGenericsBiocParallelBiostringsbitopsclicodetoolscpp11crayonformatRfutile.loggerfutile.optionsgenericsGenomicRangesglueIRangeslambda.rlifecyclemagrittroreRColorBrewerRcppreportrRhtslibrlangRNiftiRsamtoolsS4VectorsSeqinfoshadessnowstringistringrtractor.basevctrsXMLXVector

Creating IGV HTML reports with tracktables

Rendered fromtracktables.Rnwusingknitr::knitron May 30 2026.

Last update: 2014-10-12
Started: 2014-10-08