Package: tracktables 1.39.0

Tom Carroll

tracktables: Build IGV tracks and HTML reports

Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.

Authors:Tom Carroll, Sanjay Khadayate, Anne Pajon, Ziwei Liang

tracktables_1.39.0.tar.gz
tracktables_1.39.0.zip(r-4.5)tracktables_1.39.0.zip(r-4.4)tracktables_1.39.0.zip(r-4.3)
tracktables_1.39.0.tgz(r-4.4-any)tracktables_1.39.0.tgz(r-4.3-any)
tracktables_1.39.0.tar.gz(r-4.5-noble)tracktables_1.39.0.tar.gz(r-4.4-noble)
tracktables_1.39.0.tgz(r-4.4-emscripten)tracktables_1.39.0.tgz(r-4.3-emscripten)
tracktables.pdf |tracktables.html✨
tracktables/json (API)
NEWS

# Install 'tracktables' in R:
install.packages('tracktables', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On BioConductor:tracktables-1.39.0(bioc 3.20)tracktables-1.38.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

6 exports 0.82 score 47 dependencies

Last updated 2 months agofrom:1756bbcc8a

Exports:igvParammakebedtableMakeIGVSampleMetadataMakeIGVSessionMakeIGVSessionXMLmaketracktable

Dependencies:askpassBHBiocGenericsBiocParallelBiostringsbitopsclicodetoolscpp11crayoncurlformatRfutile.loggerfutile.optionsGenomeInfoDbGenomeInfoDbDataGenomicRangesgluehttrIRangesjsonlitelambda.rlifecyclemagrittrmimeopenssloreR6RColorBrewerRcppreportrRhtslibrlangRNiftiRsamtoolsS4Vectorsshadessnowstringistringrsystractor.baseUCSC.utilsvctrsXMLXVectorzlibbioc

Creating IGV HTML reports with tracktables

Rendered fromtracktables.Rnwusingknitr::knitron Jun 30 2024.

Last update: 2014-10-12
Started: 2014-10-08