Package: sights 1.33.0

Elika Garg

sights: Statistics and dIagnostic Graphs for HTS

SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.

Authors:Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]

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sights.pdf |sights.html✨
sights/json (API)
NEWS

# Install 'sights' in R:
install.packages('sights', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/eg-r/sights/issues

Datasets:
  • ex_dataMatrix - High-Throughput Screening example data - CMBA
  • inglese - High-Throughput Screening example data - Inglese

On BioConductor:sights-1.33.0(bioc 3.21)sights-1.32.0(bioc 3.20)

immunooncologycellbasedassaysmicrotitreplateassaynormalizationmultiplecomparisonpreprocessingqualitycontrolbatcheffectvisualization

4.00 score 9 scripts 256 downloads 1 mentions 19 exports 34 dependencies

Last updated 5 months agofrom:7b43510c30. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 27 2025
R-4.5-winOKMar 27 2025
R-4.5-macOKMar 27 2025
R-4.5-linuxOKMar 27 2025
R-4.4-winOKMar 27 2025
R-4.4-macOKMar 27 2025
R-4.4-linuxOKMar 27 2025
R-4.3-winOKMar 27 2025
R-4.3-macOKMar 27 2025

Exports:normLoessnormMedFilnormRnormRobZnormSightsnormSPAWNnormZplot3dplotAutocoplotBoxplotHeatmapplotHistplotIGFitplotScatterplotSightsstatFDRstatRVMstatSightsstatT

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrqvalueR6RColorBrewerRcppreshape2rlangscalesstringistringrtibbleutf8vctrsviridisLitewithr

Using SIGHTS R-package

Elika Garg, Carl Murie and Robert Nadon

Rendered fromsights.Rmdusingknitr::rmarkdownon Mar 27 2025.

Last update: 2018-08-30
Started: 2016-06-17