Package: sights 1.39.0

Elika Garg

sights: Statistics and dIagnostic Graphs for HTS

SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.

Authors:Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]

sights_1.39.0.tar.gz
sights_1.39.0.zip(r-4.7)sights_1.39.0.zip(r-4.6)sights_1.39.0.zip(r-4.5)
sights_1.39.0.tgz(r-4.6-any)sights_1.39.0.tgz(r-4.5-any)
sights_1.39.0.tar.gz(r-4.7-any)sights_1.39.0.tar.gz(r-4.6-any)
sights_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
sights/json (API)
NEWS

# Install 'sights' in R:
install.packages('sights', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/eg-r/sights/issues

Datasets:
  • ex_dataMatrix - High-Throughput Screening example data - CMBA
  • inglese - High-Throughput Screening example data - Inglese

On BioConductor:sights-1.39.0(bioc 3.24)sights-1.38.0(bioc 3.23)

immunooncologycellbasedassaysmicrotitreplateassaynormalizationmultiplecomparisonpreprocessingqualitycontrolbatcheffectvisualization

4.18 score 15 scripts 425 downloads 1 mentions 19 exports 26 dependencies

Last updated from:3b52936b34. Checks:1 WARNING, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING186
linux-devel-x86_64OK189
source / vignettesOK196
linux-release-x86_64OK194
macos-release-arm64OK129
macos-oldrel-arm64OK140
windows-develOK174
windows-releaseOK129
windows-oldrelOK135
wasm-releaseOK100

Exports:normLoessnormMedFilnormRnormRobZnormSightsnormSPAWNnormZplot3dplotAutocoplotBoxplotHeatmapplotHistplotIGFitplotScatterplotSightsstatFDRstatRVMstatSightsstatT

Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSplyrqvalueR6RColorBrewerRcppreshape2rlangS7scalesstringistringrvctrsviridisLitewithr

Using SIGHTS R-package

Elika Garg, Carl Murie and Robert Nadon

Rendered fromsights.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2018-08-30
Started: 2016-06-17