Package: siggenes 1.81.0
Holger Schwender
siggenes: Multiple Testing using SAM and Efron's Empirical Bayes Approaches
Identification of differentially expressed genes and estimation of the False Discovery Rate (FDR) using both the Significance Analysis of Microarrays (SAM) and the Empirical Bayes Analyses of Microarrays (EBAM).
Authors:
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siggenes.pdf |siggenes.html✨
siggenes/json (API)
| # Install 'siggenes' in R: |
| install.packages('siggenes', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:siggenes-1.81.0(bioc 3.21)siggenes-1.80.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
multiplecomparisonmicroarraygeneexpressionsnpexonarraydifferentialexpression
Last updated 2 months agofrom:60ae98183a. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 18 2024 |
| R-4.5-win | NOTE | Dec 18 2024 |
| R-4.5-linux | NOTE | Dec 18 2024 |
| R-4.4-win | NOTE | Dec 18 2024 |
| R-4.4-mac | NOTE | Dec 18 2024 |
| R-4.3-win | NOTE | Dec 18 2024 |
| R-4.3-mac | NOTE | Dec 18 2024 |
Exports:args.ebamargs.finda0args.samcat.ebamcat.statchisq.ebamchisq.statchisqClassd.statdensprebamebam2excelebam2htmlebamControlfind.a0findDeltafudge2fuzzy.ebamfuzzy.stathelp.ebamhelp.finda0help.samidentifylimma2ebamlimma2samlink.geneslink.siggeneslist.siggenesmd.plotna.handlingnclass.wandpi0.estplotplotArgumentsprintqvalue.calrowRanksWilcrowWilcoxonsamsam.plot2sam2excelsam2htmlsamControlshowsummarytrend.ebamtrend.statwilc.ebamwilc.statz.ebamz.find
Dependencies:BiobaseBiocGenericsgenericslatticeMASSMatrixmulttestscrimesurvival
