Package: rawDiag 1.3.4
Christian Panse
rawDiag: Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful
Optimizing methods for liquid chromatography coupled to mass spectrometry (LC-MS) poses a nontrivial challenge. The rawDiag package facilitates rational method optimization by generating MS operator-tailored diagnostic plots of scan-level metadata. The package is designed for use on the R shell or as a Shiny application on the Orbitrap instrument PC.
Authors:
rawDiag_1.3.4.tar.gz
rawDiag_1.3.4.zip(r-4.5)rawDiag_1.3.4.zip(r-4.4)rawDiag_1.1.8.zip(r-4.3)
rawDiag_1.3.4.tgz(r-4.4-any)rawDiag_1.1.8.tgz(r-4.3-any)
rawDiag_1.3.4.tar.gz(r-4.5-noble)rawDiag_1.3.4.tar.gz(r-4.4-noble)
rawDiag_1.3.4.tgz(r-4.4-emscripten)
rawDiag.pdf |rawDiag.html✨
rawDiag/json (API)
NEWS
| # Install 'rawDiag' in R: |
| install.packages('rawDiag', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fgcz/rawdiag/issues
On BioConductor:rawDiag-1.3.0(bioc 3.21)rawDiag-1.2.0(bioc 3.20)
massspectrometryproteomicsmetabolomicsinfrastructuresoftwareshinyappsfastmass-spectrometrymultiplatformorbitrapvisualization
Last updated 9 days agofrom:21b3fa239f. Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 13 2024 |
| R-4.5-win | ERROR | Nov 13 2024 |
| R-4.5-linux | ERROR | Nov 13 2024 |
| R-4.4-win | ERROR | Nov 13 2024 |
| R-4.4-mac | ERROR | Nov 13 2024 |
| R-4.3-win | ERROR | Sep 27 2024 |
| R-4.3-mac | ERROR | Sep 27 2024 |
Exports:buildRawDiagShinyAppcheckRawrris.rawDiagplotChargeStateplotCycleLoadplotCycleTimeplotInjectionTimeplotLockMassCorrectionplotMassDistributionplotMzDistributionplotPrecursorHeatmapplotScanTimeplotTicBasepeakrawDiagServerrawDiagUIreadRaw
Dependencies:base64encBHBiocManagerBiocParallelbslibcachemclicodetoolscolorspacecommonmarkcpp11crayondigestdplyrfansifarverfastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsggplot2gluegtablehexbinhtmltoolshttpuvisobandjquerylibjsonlitelabelinglambda.rlaterlatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigplyrpromisesR6rappdirsrawrrRColorBrewerRcppreshape2rlangsassscalesshinysnowsourcetoolsstringistringrtibbletidyselectutf8vctrsviridisLitewithrxtable
