Package: pmm 1.39.0

Anna Drewek

pmm: Parallel Mixed Model

The Parallel Mixed Model (PMM) approach is suitable for hit selection and cross-comparison of RNAi screens generated in experiments that are performed in parallel under several conditions. For example, we could think of the measurements or readouts from cells under RNAi knock-down, which are infected with several pathogens or which are grown from different cell lines.

Authors:Anna Drewek

pmm_1.39.0.tar.gz
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pmm_1.39.0.tgz(r-4.4-any)pmm_1.39.0.tgz(r-4.3-any)
pmm_1.39.0.tar.gz(r-4.5-noble)pmm_1.39.0.tar.gz(r-4.4-noble)
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pmm.pdf |pmm.html
pmm/json (API)
NEWS

# Install 'pmm' in R:
install.packages('pmm', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • kinome - Example Data from InfectX

On BioConductor:pmm-1.39.0(bioc 3.21)pmm-1.38.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

systemsbiologyregression

4.15 score 3 scripts 175 downloads 7 mentions 3 exports 10 dependencies

Last updated 2 months agofrom:0b45c51de6. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 30 2024
R-4.5-winNOTENov 30 2024
R-4.5-linuxNOTENov 30 2024
R-4.4-winNOTENov 30 2024
R-4.4-macNOTENov 30 2024
R-4.3-winNOTENov 30 2024
R-4.3-macNOTENov 30 2024

Exports:hitheatmappmmsharedness

Dependencies:bootlatticelme4MASSMatrixminqanlmenloptrRcppRcppEigen

User manual for R-Package PMM

Rendered frompmm-package.Rnwusingutils::Sweaveon Nov 30 2024.

Last update: 2015-03-31
Started: 2015-03-31