Package: plotgardener 1.11.3
plotgardener: Coordinate-Based Genomic Visualization Package for R
Coordinate-based genomic visualization package for R. It grants users the ability to programmatically produce complex, multi-paneled figures. Tailored for genomics, plotgardener allows users to visualize large complex genomic datasets and provides exquisite control over how plots are placed and arranged on a page.
Authors:
plotgardener_1.11.3.tar.gz
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plotgardener_1.11.3.tgz(r-4.4-arm64)plotgardener_1.11.3.tgz(r-4.4-x86_64)plotgardener_1.11.3.tgz(r-4.3-arm64)plotgardener_1.11.3.tgz(r-4.3-x86_64)
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plotgardener.pdf |plotgardener.html✨
plotgardener/json (API)
NEWS
# Install 'plotgardener' in R: |
install.packages('plotgardener', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/phanstiellab/plotgardener/issues
On BioConductor:plotgardener-1.11.2(bioc 3.20)plotgardener-1.10.1(bioc 3.19)
Last updated 12 days agofrom:72d6abd1c3
Exports:annoDomainsannoGenomeLabelannoHeatmapLegendannoHighlightannoPixelsannoSegmentsannoTextannoXaxisannoYaxisannoZoomLinesassemblyccalcSignalRangecolorbydefaultPackagesgenomesmapColorspageCreatepageGuideHidepageGuideHorizontalpageGuideShowpageGuideVerticalpageLayoutColpageLayoutRowpagePlotPlacepagePlotRemovepgParamsplotCircleplotGenesplotGenomeLabelplotGGplotHicRectangleplotHicSquareplotHicTriangleplotIdeogramplotLegendplotManhattanplotMultiSignalplotPairsplotPairsArchesplotPolygonplotRangesplotRasterplotRectplotSegmentsplotSignalplotTextplotTranscriptsreadBigwigreadCoolreadCoolBpResolutionsreadCoolChromsreadCoolNormsreadHic
Dependencies:abindaskpassBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitopscachemclicodetoolscolorspacecpp11crayoncurldata.tableDelayedArraydigestdplyrfansifarverfastmapformatRfsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2ggplotifygluegridGraphicsgtablehttrIRangesisobandjsonlitelabelinglambda.rlatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplyrangespurrrR6RColorBrewerRcppRCurlrestfulrrhdf5rhdf5filtersRhdf5libRhtslibrjsonrlangRsamtoolsrtracklayerS4ArraysS4VectorsscalessnowSparseArraystrawrSummarizedExperimentsystibbletidyselectUCSC.utilsutf8vctrsviridisLitewithrXMLXVectoryamlyulab.utilszlibbioc