Package: phosphonormalizer 1.29.0
phosphonormalizer: Compensates for the bias introduced by median normalization in
It uses the overlap between enriched and non-enriched datasets to compensate for the bias introduced in global phosphorylation after applying median normalization.
Authors:
phosphonormalizer_1.29.0.tar.gz
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phosphonormalizer.pdf |phosphonormalizer.html✨
phosphonormalizer/json (API)
NEWS
# Install 'phosphonormalizer' in R: |
install.packages('phosphonormalizer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- enriched.rd - Enriched dataset
- non.enriched.rd - Non-enriched dataset
On BioConductor:phosphonormalizer-1.29.0(bioc 3.20)phosphonormalizer-1.28.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:1aed6bf1fa
Exports:normalizePhospho
Dependencies:matrixStatsplyrRcpp
phosphonormalizer: Pairwise normalization of phosphoproteomics data
Rendered fromvignette.Rmd
usingknitr::rmarkdown
on Jun 30 2024.Last update: 2018-08-30
Started: 2016-11-28
phosphonormalizer: Phosphoproteomics Normalization
Rendered fromphosphonormalizer.Rnw
usingutils::Sweave
on Jun 30 2024.Last update: 2018-08-30
Started: 2016-11-28
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Enriched dataset | enriched.rd |
Non-enriched dataset | non.enriched.rd |
Pairwise Normalization of MS-based phosphoproteomic data | normalizePhospho |