Package: pepXMLTab 1.41.0

Xiaojing Wang

pepXMLTab: Parsing pepXML files and filter based on peptide FDR.

Parsing pepXML files based one XML package. The package tries to handle pepXML files generated from different softwares. The output will be a peptide-spectrum-matching tabular file. The package also provide function to filter the PSMs based on FDR.

Authors:Xiaojing Wang

pepXMLTab_1.41.0.tar.gz
pepXMLTab_1.41.0.zip(r-4.5)pepXMLTab_1.41.0.zip(r-4.4)pepXMLTab_1.41.0.zip(r-4.3)
pepXMLTab_1.41.0.tgz(r-4.4-any)pepXMLTab_1.41.0.tgz(r-4.3-any)
pepXMLTab_1.41.0.tar.gz(r-4.5-noble)pepXMLTab_1.41.0.tar.gz(r-4.4-noble)
pepXMLTab_1.41.0.tgz(r-4.4-emscripten)pepXMLTab_1.41.0.tgz(r-4.3-emscripten)
pepXMLTab.pdf |pepXMLTab.html
pepXMLTab/json (API)
NEWS

# Install 'pepXMLTab' in R:
install.packages('pepXMLTab', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:pepXMLTab-1.41.0(bioc 3.21)pepXMLTab-1.40.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologyproteomicsmassspectrometry

3.60 score 9 scripts 223 downloads 2 mentions 2 exports 1 dependencies

Last updated 2 months agofrom:6c9f5e25ee. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 29 2024
R-4.5-winNOTENov 29 2024
R-4.5-linuxNOTENov 29 2024
R-4.4-winNOTENov 29 2024
R-4.4-macNOTENov 29 2024
R-4.3-winNOTENov 29 2024
R-4.3-macNOTENov 29 2024

Exports:pepXML2tabPSMfilter

Dependencies:XML

Introduction to pepXMLTab

Rendered frompepXMLTab.Rnwusingutils::Sweaveon Nov 29 2024.

Last update: 2014-10-14
Started: 2014-10-14