Package: pathifier 1.43.0

Assif Yitzhaky

pathifier: Quantify deregulation of pathways in cancer

Pathifier is an algorithm that infers pathway deregulation scores for each tumor sample on the basis of expression data. This score is determined, in a context-specific manner, for every particular dataset and type of cancer that is being investigated. The algorithm transforms gene-level information into pathway-level information, generating a compact and biologically relevant representation of each sample.

Authors:Yotam Drier

pathifier_1.43.0.tar.gz
pathifier_1.43.0.zip(r-4.5)pathifier_1.43.0.zip(r-4.4)pathifier_1.43.0.zip(r-4.3)
pathifier_1.43.0.tgz(r-4.4-any)pathifier_1.43.0.tgz(r-4.3-any)
pathifier_1.43.0.tar.gz(r-4.5-noble)pathifier_1.43.0.tar.gz(r-4.4-noble)
pathifier_1.43.0.tgz(r-4.4-emscripten)pathifier_1.43.0.tgz(r-4.3-emscripten)
pathifier.pdf |pathifier.html✨
pathifier/json (API)

Peer review:

On BioConductor:pathifier-1.43.0(bioc 3.20)pathifier-1.42.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

1 exports 2.31 score 4 dependencies 1 dependents 7 mentions

Last updated 2 months agofrom:9db33da804

Exports:quantify_pathways_deregulation

Dependencies:princurveR.methodsS3R.ooRcpp