Package: omicade4 1.47.0

Chen Meng

omicade4: Multiple co-inertia analysis of omics datasets

This package performes multiple co-inertia analysis of omics datasets.

Authors:Chen Meng, Aedin Culhane, Amin M. Gholami.

omicade4_1.47.0.tar.gz
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omicade4.pdf |omicade4.html✨
omicade4/json (API)
NEWS

# Install 'omicade4' in R:
install.packages('omicade4', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • NCI60_4arrays - Microarray gene expression profiles of the NCI 60 cell lines from 4 different platforms

On BioConductor:omicade4-1.47.0(bioc 3.21)omicade4-1.46.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwareclusteringclassificationmultiplecomparison

5.47 score 1 packages 49 scripts 444 downloads 12 mentions 5 exports 43 dependencies

Last updated 2 months agofrom:8db5f0ee1a. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 29 2024
R-4.5-winNOTENov 29 2024
R-4.5-linuxNOTENov 29 2024
R-4.4-winNOTENov 29 2024
R-4.4-macNOTENov 29 2024
R-4.3-winNOTENov 29 2024
R-4.3-macNOTENov 29 2024

Exports:mciaplot.mciaplotVarselectVartopVar

Dependencies:abindade4askpassBiobaseBiocGenericsbitopscaToolscrayoncurlDelayedArraygenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesgplotsgtoolshttrIRangesjsonliteKernSmoothlatticemade4MASSMatrixMatrixGenericsmatrixStatsmimeopensslpixmapR6RColorBrewerRcppRcppArmadilloS4ArraysS4Vectorsscatterplot3dspSparseArraySummarizedExperimentsysUCSC.utilsXVectorzlibbioc

Using omicade4

Rendered fromomicade4.Rnwusingutils::Sweaveon Nov 29 2024.

Last update: 2013-11-27
Started: 2013-10-23