Package: microRNA 1.65.0
"James F. Reid"
microRNA: Data and functions for dealing with microRNAs
Different data resources for microRNAs and some functions for manipulating them.
Authors:
microRNA_1.65.0.tar.gz
microRNA_1.65.0.zip(r-4.5)microRNA_1.65.0.zip(r-4.4)microRNA_1.65.0.zip(r-4.3)
microRNA_1.65.0.tgz(r-4.4-x86_64)microRNA_1.65.0.tgz(r-4.4-arm64)microRNA_1.65.0.tgz(r-4.3-x86_64)microRNA_1.65.0.tgz(r-4.3-arm64)
microRNA_1.65.0.tar.gz(r-4.5-noble)microRNA_1.65.0.tar.gz(r-4.4-noble)
microRNA_1.65.0.tgz(r-4.4-emscripten)microRNA_1.65.0.tgz(r-4.3-emscripten)
microRNA.pdf |microRNA.html✨
microRNA/json (API)
| # Install 'microRNA' in R: |
| install.packages('microRNA', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:microRNA-1.63.0(bioc 3.20)microRNA-1.62.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
infrastructuregenomeannotationsequencematching
Last updated 26 days agofrom:fcc2f78f0a. Checks:OK: 9. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win-x86_64 | OK | Oct 31 2024 |
| R-4.5-linux-x86_64 | OK | Oct 30 2024 |
| R-4.4-win-x86_64 | OK | Oct 31 2024 |
| R-4.4-mac-x86_64 | OK | Oct 31 2024 |
| R-4.4-mac-aarch64 | OK | Oct 31 2024 |
| R-4.3-win-x86_64 | OK | Oct 31 2024 |
| R-4.3-mac-x86_64 | OK | Oct 31 2024 |
| R-4.3-mac-aarch64 | OK | Oct 31 2024 |
Exports:get_selfhyb_subseqmatchSeedsRNA2DNAseedRegionsshow_selfhyb_countsshow_selfhyb_lengths
Dependencies:askpassBiocGenericsBiostringscrayoncurlGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitemimeopensslR6S4VectorssysUCSC.utilsXVectorzlibbioc
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Get Self-Hybridizing Subsequences | get_selfhyb_subseq show_selfhyb_counts show_selfhyb_lengths |
| Human Mature microRNA Sequences | hsSeqs |
| Human microRNAs and their target IDs | hsTargets |
| A function to match seed regions to sequences. | matchSeeds |
| Mouse Mature microRNA Sequences | mmSeqs |
| Mouse microRNAs and their target IDs | mmTargets |
| A Function to translate RNA sequences into DNA sequences. | RNA2DNA |
| Test sequence data | s3utr |
| A function to retrieve the seed regions from microRNA sequences | seedRegions |