Package: maskBAD 1.49.0

Michael Dannemann

maskBAD: Masking probes with binding affinity differences

Package includes functions to analyze and mask microarray expression data.

Authors:Michael Dannemann <[email protected]>

maskBAD_1.49.0.tar.gz
maskBAD_1.49.0.zip(r-4.5)maskBAD_1.49.0.zip(r-4.4)maskBAD_1.49.0.zip(r-4.3)
maskBAD_1.49.0.tgz(r-4.4-any)maskBAD_1.49.0.tgz(r-4.3-any)
maskBAD_1.49.0.tar.gz(r-4.5-noble)maskBAD_1.49.0.tar.gz(r-4.4-noble)
maskBAD_1.49.0.tgz(r-4.4-emscripten)maskBAD_1.49.0.tgz(r-4.3-emscripten)
maskBAD.pdf |maskBAD.html✨
maskBAD/json (API)

# Install 'maskBAD' in R:
install.packages('maskBAD', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • exmask - Output object of the function mask
  • newAffyBatch - AffyBatch with reduced genes
  • newCdf - Object of type environment
  • sequenceMask - Object containing sequence information for probes.

On BioConductor:maskBAD-1.49.0(bioc 3.20)maskBAD-1.48.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 1.38 score 24 dependencies 2 mentions

Last updated 2 months agofrom:4ae4138a32

Exports:maskoverlapExprExtMasksplotProbeprepareMaskedAffybatch

Dependencies:affyaffyioaskpassBiobaseBiocGenericsBiocManagerBiostringscrayoncurlgcrmaGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitemimeopensslpreprocessCoreR6S4VectorssysUCSC.utilsXVectorzlibbioc