Package: maskBAD 1.51.0
Michael Dannemann
maskBAD: Masking probes with binding affinity differences
Package includes functions to analyze and mask microarray expression data.
Authors:
maskBAD_1.51.0.tar.gz
maskBAD_1.51.0.zip(r-4.5)maskBAD_1.51.0.zip(r-4.4)maskBAD_1.51.0.zip(r-4.3)
maskBAD_1.51.0.tgz(r-4.4-any)maskBAD_1.51.0.tgz(r-4.3-any)
maskBAD_1.51.0.tar.gz(r-4.5-noble)maskBAD_1.51.0.tar.gz(r-4.4-noble)
maskBAD_1.51.0.tgz(r-4.4-emscripten)maskBAD_1.51.0.tgz(r-4.3-emscripten)
maskBAD.pdf |maskBAD.html✨
maskBAD/json (API)
| # Install 'maskBAD' in R: |
| install.packages('maskBAD', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- exmask - Output object of the function mask
- newAffyBatch - AffyBatch with reduced genes
- newCdf - Object of type environment
- sequenceMask - Object containing sequence information for probes.
On BioConductor:maskBAD-1.49.0(bioc 3.21)maskBAD-1.50.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 23 days agofrom:a9dbb0e079. Checks:ERROR: 1 WARNING: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | FAIL | Oct 31 2024 |
| R-4.5-win | WARNING | Oct 31 2024 |
| R-4.5-linux | WARNING | Oct 31 2024 |
| R-4.4-win | WARNING | Oct 31 2024 |
| R-4.4-mac | WARNING | Oct 31 2024 |
| R-4.3-win | WARNING | Oct 31 2024 |
| R-4.3-mac | WARNING | Oct 31 2024 |
Exports:maskoverlapExprExtMasksplotProbeprepareMaskedAffybatch
Dependencies:affyaffyioaskpassBiobaseBiocGenericsBiocManagerBiostringscrayoncurlgcrmaGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitemimeopensslpreprocessCoreR6S4VectorssysUCSC.utilsXVectorzlibbioc
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Output object of the function mask | exmask |
| AffyBatch with reduced genes | newAffyBatch |
| Object of type environment | newCdf |
| Object containing sequence information for probes. | sequenceMask |