Package: m6Aboost 1.11.0
You Zhou
m6Aboost: m6Aboost
This package can help user to run the m6Aboost model on their own miCLIP2 data. The package includes functions to assign the read counts and get the features to run the m6Aboost model. The miCLIP2 data should be stored in a GRanges object. More details can be found in the vignette.
Authors:
m6Aboost_1.11.0.tar.gz
m6Aboost_1.11.0.zip(r-4.5)m6Aboost_1.11.0.zip(r-4.4)m6Aboost_1.11.0.zip(r-4.3)
m6Aboost_1.11.0.tgz(r-4.4-any)m6Aboost_1.11.0.tgz(r-4.3-any)
m6Aboost_1.11.0.tar.gz(r-4.5-noble)m6Aboost_1.11.0.tar.gz(r-4.4-noble)
m6Aboost_1.11.0.tgz(r-4.4-emscripten)m6Aboost_1.11.0.tgz(r-4.3-emscripten)
m6Aboost.pdf |m6Aboost.html✨
m6Aboost/json (API)
NEWS
| # Install 'm6Aboost' in R: |
| install.packages('m6Aboost', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/zarnackgroup/m6aboost/issues
On BioConductor:m6Aboost-1.11.0(bioc 3.20)m6Aboost-1.10.0(bioc 3.19)
Last updated 2 months agofrom:139401a3f0
Exports:CtoTAssignmentm6AboostpreparingDatatruncationAssignment
Dependencies:abindadabagAnnotationDbiAnnotationHubaskpassbase64encBHBiobaseBiocFileCacheBiocGenericsBiocIOBiocManagerBiocParallelBiocVersionBiostringsbitbit64bitopsblobBSgenomebslibcachemcaretclasscliclockcodetoolscolorspaceConsRankcpp11crayoncurldata.tableDBIdbplyrDelayedArraydiagramdigestdoParalleldplyre1071ellipsisevaluateExperimentHubfansifarverfastmapfilelockfontawesomeforeachformatRfsfutile.loggerfutile.optionsfuturefuture.applygenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2globalsgluegowergtablegtoolshardhathighrhtmltoolshtmlwidgetshttripredIRangesisobanditeratorsjquerylibjsonliteKEGGRESTKernSmoothknitrlabelinglambda.rlatticelavalifecyclelistenvlubridatemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimeModelMetricsmunsellnlmennetnumDerivopensslparallellypillarpkgconfigplogrplyrpngpROCprodlimprogressrproxypurrrR6rappdirsRColorBrewerRcppRCurlrecipesreshape2restfulrrglRhtslibrjsonrlangrlistrmarkdownrpartRsamtoolsRSQLitertracklayerS4ArraysS4VectorssassscalesshapesnowSparseArraySQUAREMstringistringrSummarizedExperimentsurvivalsystibbletidyrtidyselecttimechangetimeDatetinytextzdbUCSC.utilsutf8vctrsviridisLitewithrxfunXMLXVectoryamlzlibbioc
