Package: interacCircos 1.23.0
Zhe Cui
interacCircos: The Generation of Interactive Circos Plot
Implement in an efficient approach to display the genomic data, relationship, information in an interactive circular genome(Circos) plot. 'interacCircos' are inspired by 'circosJS', 'BioCircos.js' and 'NG-Circos' and we integrate the modules of 'circosJS', 'BioCircos.js' and 'NG-Circos' into this R package, based on 'htmlwidgets' framework.
Authors:
interacCircos_1.23.0.tar.gz
interacCircos_1.23.0.zip(r-4.7)interacCircos_1.23.0.zip(r-4.6)interacCircos_1.23.0.zip(r-4.5)
interacCircos_1.23.0.tgz(r-4.6-any)interacCircos_1.23.0.tgz(r-4.5-any)
interacCircos_1.23.0.tar.gz(r-4.7-any)interacCircos_1.23.0.tar.gz(r-4.6-any)
interacCircos_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
interacCircos/json (API)
| # Install 'interacCircos' in R: |
| install.packages('interacCircos', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- arcExample - Arc plot example data
- bubbleExample - Bubble plot example data
- chord.pExample - Example data of chord plot of circosJS
- chordExample - Example data of chord plot of NG-Circos
- cnvExample - Cnv module example data
- geneExample - Gene plot example data
- heatmapExample - Heatmap plot example data
- hg19_ideogram - Ideogram for hg19
- histogramExample - Histogram plot example data
- lineExample - Line plot example data
- linkExample - Link plot example data
- lollipopExample - Lollipop plot example data
- scatterExample - Scatter plot example data
- snpExample - Snp plot example data
- wigExample - Wig plot example data
On BioConductor:interacCircos-1.23.0(bioc 3.24)interacCircos-1.22.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:159ef8805d. Checks:1 WARNING, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 144 | ||
| linux-devel-x86_64 | OK | 192 | ||
| source / vignettes | OK | 189 | ||
| linux-release-x86_64 | OK | 183 | ||
| macos-release-arm64 | OK | 97 | ||
| macos-oldrel-arm64 | OK | 78 | ||
| windows-devel | OK | 77 | ||
| windows-release | OK | 93 | ||
| windows-oldrel | OK | 79 | ||
| wasm-release | OK | 113 |
Exports:CircosCircosArcCircosAuxLineCircosBackgroundCircosBubbleCircosChordCircosChord.pCircosCnvCircosGeneCircosHeatmapCircosHistogramCircosLegendCircosLineCircosLinkCircosLollipopCircosModuleListCircosScatterCircosSnpCircosTextCircosWig
Dependencies:base64encbslibcachemclidigestevaluatefastmapfontawesomefshighrhtmltoolshtmlwidgetsjquerylibjsonliteknitrlifecyclememoisemimeplyrR6rappdirsRColorBrewerRcpprlangrmarkdownsasstinytexxfunyaml
