Package: iSeq 1.59.0

Qianxing Mo

iSeq: Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models

Bayesian hidden Ising models are implemented to identify IP-enriched genomic regions from ChIP-seq data. They can be used to analyze ChIP-seq data with and without controls and replicates.

Authors:Qianxing Mo

iSeq_1.59.0.tar.gz
iSeq_1.59.0.zip(r-4.5)iSeq_1.59.0.zip(r-4.4)iSeq_1.59.0.zip(r-4.3)
iSeq_1.59.0.tgz(r-4.4-x86_64)iSeq_1.59.0.tgz(r-4.4-arm64)iSeq_1.59.0.tgz(r-4.3-x86_64)iSeq_1.59.0.tgz(r-4.3-arm64)
iSeq_1.59.0.tar.gz(r-4.5-noble)iSeq_1.59.0.tar.gz(r-4.4-noble)
iSeq_1.59.0.tgz(r-4.4-emscripten)iSeq_1.59.0.tgz(r-4.3-emscripten)
iSeq.pdf |iSeq.html
iSeq/json (API)
NEWS

# Install 'iSeq' in R:
install.packages('iSeq', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On BioConductor:iSeq-1.59.0(bioc 3.21)iSeq-1.58.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

chipseqsequencing

4.30 score 2 scripts 191 downloads 14 mentions 5 exports 0 dependencies

Last updated 2 months agofrom:f08fc7eb0b. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 18 2024
R-4.5-win-x86_64OKDec 18 2024
R-4.5-linux-x86_64OKDec 18 2024
R-4.4-win-x86_64OKDec 18 2024
R-4.4-mac-x86_64OKDec 18 2024
R-4.4-mac-aarch64OKDec 18 2024
R-4.3-win-x86_64OKDec 18 2024
R-4.3-mac-x86_64OKDec 18 2024
R-4.3-mac-aarch64OKDec 18 2024

Exports:iSeq1iSeq2mergetagpeakregplotreg

Dependencies:

iSeq

Rendered fromiSeq.Rnwusingutils::Sweaveon Dec 18 2024.

Last update: 2018-09-26
Started: 2013-11-01