Package: globalSeq 1.35.0

Armin Rauschenberger

globalSeq: Global Test for Counts

The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size. Useful for testing for association between RNA-Seq and high-dimensional data.

Authors:Armin Rauschenberger [aut, cre]

globalSeq_1.35.0.tar.gz
globalSeq_1.35.0.zip(r-4.5)globalSeq_1.35.0.zip(r-4.4)globalSeq_1.35.0.zip(r-4.3)
globalSeq_1.35.0.tgz(r-4.5-any)globalSeq_1.35.0.tgz(r-4.4-any)globalSeq_1.35.0.tgz(r-4.3-any)
globalSeq_1.35.0.tar.gz(r-4.5-noble)globalSeq_1.35.0.tar.gz(r-4.4-noble)
globalSeq_1.35.0.tgz(r-4.4-emscripten)globalSeq_1.35.0.tgz(r-4.3-emscripten)
globalSeq.pdf |globalSeq.html
globalSeq/json (API)
NEWS

# Install 'globalSeq' in R:
install.packages('globalSeq', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rauschenberger/globalseq/issues

On BioConductor:globalSeq-1.35.0(bioc 3.21)globalSeq-1.34.0(bioc 3.20)

geneexpressionexonarraydifferentialexpressiongenomewideassociationtranscriptomicsdimensionreductionregressionsequencingwholegenomernaseqexomeseqmirnamultiplecomparison

5.32 score 1 stars 4 scripts 204 downloads 15 exports 0 dependencies

Last updated 4 months agofrom:68e448d730. Checks:7 OK, 1 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 30 2025
R-4.5-winOKJan 30 2025
R-4.5-macOKJan 30 2025
R-4.5-linuxERRORJan 30 2025
R-4.4-winOKJan 30 2025
R-4.4-macOKJan 30 2025
R-4.3-winOKJan 30 2025
R-4.3-macOKJan 30 2025

Exports:cursusintern.chromointern.convaintern.covintern.crudeintern.estimintern.focusintern.matrixintern.permuintern.plotintern.samintern.scoreintern.selectomnibusproprius

Dependencies:

article frame

Rendered fromarticle.Rmdusingknitr::rmarkdownon Jan 30 2025.

Last update: 2020-03-02
Started: 2017-04-12

vignette frame

Rendered fromvignette.Rmdusingknitr::rmarkdownon Jan 30 2025.

Last update: 2020-03-02
Started: 2017-04-12

vignette source

Rendered fromglobalSeq.Rnwusingknitr::knitron Jan 30 2025.

Last update: 2019-01-29
Started: 2015-11-13