Package: gg4way 1.3.0

Benjamin I Laufer

gg4way: 4way Plots of Differential Expression

4way plots enable a comparison of the logFC values from two contrasts of differential gene expression. The gg4way package creates 4way plots using the ggplot2 framework and supports popular Bioconductor objects. The package also provides information about the correlation between contrasts and significant genes of interest.

Authors:Benjamin I Laufer [aut, cre], Brad A Friedman [aut]

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Bug tracker:https://github.com/ben-laufer/gg4way/issues

On BioConductor:gg4way-1.3.0(bioc 3.20)gg4way-1.2.0(bioc 3.19)

bioconductor-package

4 exports 0.91 score 82 dependencies

Last updated 2 months agofrom:41c67f3c9e

Exports:getCorgetSharedgetTotalsgg4way

Dependencies:abindaskpassBHBiobaseBiocGenericsBiocParallelclicodetoolscolorspacecpp11crayoncurlDelayedArrayDESeq2dplyredgeRfansifarverformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2ggrepelgluegtablehmshttrIRangesisobandjanitorjsonlitelabelinglambda.rlatticelifecyclelimmalocfitlubridatemagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigpurrrR6RColorBrewerRcppRcppArmadillorlangS4ArraysS4VectorsscalessnakecasesnowSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttimechangeUCSC.utilsutf8vctrsviridisLitewithrXVectorzlibbioc