Licensing | Overview | Example: Optimizing Data Transformations for the GvHD Data Set | Future Improvements
Package: flowTrans 1.65.0
Greg Finak
flowTrans: Parameter Optimization for Flow Cytometry Data Transformation
Profile maximum likelihood estimation of parameters for flow cytometry data transformations.
Authors:
flowTrans_1.65.0.tar.gz
flowTrans_1.65.0.zip(r-4.7)flowTrans_1.65.0.zip(r-4.6)flowTrans_1.65.0.zip(r-4.5)
flowTrans_1.65.0.tgz(r-4.6-any)flowTrans_1.65.0.tgz(r-4.5-any)
flowTrans_1.65.0.tar.gz(r-4.7-any)flowTrans_1.65.0.tar.gz(r-4.6-any)
flowTrans_1.65.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
flowTrans/json (API)
| # Install 'flowTrans' in R: |
| install.packages('flowTrans', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:flowTrans-1.65.0(bioc 3.24)flowTrans-1.64.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:70a005ad1a. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 158 | ||
| linux-devel-x86_64 | NOTE | 237 | ||
| source / vignettes | OK | 242 | ||
| linux-release-x86_64 | NOTE | 230 | ||
| macos-release-arm64 | NOTE | 113 | ||
| macos-oldrel-arm64 | NOTE | 116 | ||
| windows-devel | NOTE | 117 | ||
| windows-release | NOTE | 121 | ||
| windows-oldrel | NOTE | 120 | ||
| wasm-release | OK | 143 |
Exports:extractParamsflowTranssummary.flowTransResult
Dependencies:BHBiobaseBiocGenericsbiocmakecpp11cytolibdeldirdir.expiryfilelockflowClustflowCoreflowVizgenericsgraphhexbinIDPmiscinterpjpegKernSmoothlatticelatticeExtraMASSmatrixStatspngRColorBrewerRcppRcppEigenRhdf5libRProtoBufLibS4Vectors
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Parameter Optimization for Flow Cytometry Data Transformation | flowTrans-package |
| Extract the transformation parameters from a flowTransResult | extractParams |
| Optimizing transformations for flow cytometry data. | flowTrans |
| S4 method for optimizing parameters of a flow transformation and optionally transforming a flowFrame | flowTrans,flowFrame,character,character,logical,logical-method flowTrans-methods |
| Class "flowTransResult" | flowTransResult flowTransResult-class summary,flowTransResult-class |
| Summarize a flowTransResult object | summary summary,flowTransResult-method summary-methods |
| Summarize a flowTransResult object | summary.flowTransResult |