Package: flowTrans 1.59.0

Greg Finak

flowTrans: Parameter Optimization for Flow Cytometry Data Transformation

Profile maximum likelihood estimation of parameters for flow cytometry data transformations.

Authors:Greg Finak <[email protected]>, Juan Manuel-Perez <[email protected]>, Raphael Gottardo <[email protected]>

flowTrans_1.59.0.tar.gz
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flowTrans.pdf |flowTrans.html✨
flowTrans/json (API)

# Install 'flowTrans' in R:
install.packages('flowTrans', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:flowTrans-1.59.0(bioc 3.21)flowTrans-1.58.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologyflowcytometry

4.40 score 21 scripts 272 downloads 6 mentions 3 exports 27 dependencies

Last updated 2 months agofrom:0b7c9054c8. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 05 2024
R-4.5-winNOTEDec 05 2024
R-4.5-linuxNOTEDec 05 2024
R-4.4-winNOTEDec 05 2024
R-4.4-macNOTEDec 05 2024
R-4.3-winNOTEDec 05 2024
R-4.3-macNOTEDec 05 2024

Exports:extractParamsflowTranssummary.flowTransResult

Dependencies:BHBiobaseBiocGenericscpp11cytolibdeldirflowClustflowCoreflowVizgenericsgraphhexbinIDPmiscinterpjpegKernSmoothlatticelatticeExtraMASSmatrixStatspngRColorBrewerRcppRcppEigenRhdf5libRProtoBufLibS4Vectors

flowTrans package

Rendered fromflowTrans.Rnwusingutils::Sweaveon Dec 05 2024.

Last update: 2013-11-01
Started: 2013-11-01

Readme and manuals

Help Manual

Help pageTopics
Parameter Optimization for Flow Cytometry Data TransformationflowTrans-package
Extract the transformation parameters from a flowTransResultextractParams
Optimizing transformations for flow cytometry data.flowTrans
S4 method for optimizing parameters of a flow transformation and optionally transforming a flowFrameflowTrans,flowFrame,character,character,logical,logical-method flowTrans-methods
Class "flowTransResult"flowTransResult flowTransResult-class summary,flowTransResult-class
Summarize a flowTransResult objectsummary summary,flowTransResult-method summary-methods
Summarize a flowTransResult objectsummary.flowTransResult