Package: flowCut 1.23.0

Justin Meskas

flowCut: Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis

Common techinical complications such as clogging can result in spurious events and fluorescence intensity shifting, flowCut is designed to detect and remove technical artifacts from your data by removing segments that show statistical differences from other segments.

Authors:Justin Meskas [cre, aut], Sherrie Wang [aut]

flowCut_1.23.0.tar.gz
flowCut_1.23.0.zip(r-4.7)flowCut_1.23.0.zip(r-4.6)flowCut_1.23.0.zip(r-4.5)
flowCut_1.23.0.tgz(r-4.6-any)flowCut_1.23.0.tgz(r-4.5-any)
flowCut_1.23.0.tar.gz(r-4.7-any)flowCut_1.23.0.tar.gz(r-4.6-any)
flowCut_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
flowCut/json (API)
NEWS

# Install 'flowCut' in R:
install.packages('flowCut', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • flowCutData - A list containing two GvHD flow frames from flowCore

On BioConductor:flowCut-1.23.0(bioc 3.24)flowCut-1.22.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

flowcytometrypreprocessingqualitycontrolcellbasedassays

4.02 score 26 scripts 440 downloads 2 mentions 2 exports 100 dependencies

Last updated from:505f10900f. Checks:1 WARNING, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING172
linux-devel-x86_64OK259
source / vignettesOK254
linux-release-x86_64OK256
macos-release-arm64OK148
macos-oldrel-arm64OK122
windows-develOK170
windows-releaseOK175
windows-oldrelOK164
wasm-releaseOK155

Exports:flowCutremoveLowDensSections

Dependencies:abindbackportsBHBiobaseBiocGenericsbiocmakebitopsbootbroomCairocarcarDatacaToolsclassclicolorspacecowplotcpp11cytolibdeldirDerivdir.expirydoBydplyre1071farverfilelockflowCoreflowDensityflowVizforecastFormulafracdiffgenericsggplot2gluegplotsgtablegtoolshexbinIDPmiscinterpisobandjpegKernSmoothlabelinglatticelatticeExtralifecyclelme4lmtestmagrittrMASSMatrixMatrixModelsmatrixStatsmgcvmicrobenchmarkminqamodelrnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpngpolyclipproxypurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasRhdf5librlangRProtoBufLibS4VectorsS7scalesSparseMstringistringrsurvivaltibbletidyrtidyselecttimeDateurcautf8vctrsviridisLitewithrzoo

flowCut: Precise and Accurate Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis

Justin Meskas, Sherrie Wang

Rendered fromflowCut.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2022-02-17
Started: 2018-02-02