Package: flowCut 1.15.0

Justin Meskas

flowCut: Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis

Common techinical complications such as clogging can result in spurious events and fluorescence intensity shifting, flowCut is designed to detect and remove technical artifacts from your data by removing segments that show statistical differences from other segments.

Authors:Justin Meskas [cre, aut], Sherrie Wang [aut]

flowCut_1.15.0.tar.gz
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flowCut.pdf |flowCut.html
flowCut/json (API)
NEWS

# Install 'flowCut' in R:
install.packages('flowCut', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • flowCutData - A list containing two GvHD flow frames from flowCore

On BioConductor:flowCut-1.15.0(bioc 3.20)flowCut-1.14.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

2 exports 0.91 score 97 dependencies 2 mentions

Last updated 2 months agofrom:6584983345

Exports:flowCutremoveLowDensSections

Dependencies:abindbackportsBHBiobaseBiocGenericsbitopsbootbriobroomCairocallrcarcarDatacaToolsclassclicolorspacecpp11crayoncytolibdeldirdescdiffobjdigestdplyre1071evaluatefansifarverflowCoreflowDensityflowVizfsgenericsgluegplotsgtoolshexbinIDPmiscinterpjpegjsonliteKernSmoothlabelinglatticelatticeExtralifecyclelme4magrittrMASSMatrixMatrixModelsmatrixStatsmgcvminqamunsellnlmenloptrnnetnumDerivpbkrtestpillarpkgbuildpkgconfigpkgloadpngpolyclippraiseprocessxproxypspurrrquantregR6RColorBrewerRcppRcppEigenrematch2Rhdf5librlangrprojrootRProtoBufLibS4VectorsscalesSparseMstringistringrsurvivaltestthattibbletidyrtidyselectutf8vctrsviridisLitewaldowithr

flowCut: Precise and Accurate Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis

Rendered fromflowCut.Rmdusingknitr::rmarkdownon Jun 15 2024.

Last update: 2022-02-17
Started: 2018-02-02