Introduction | Overview | Details | Example data | Methods
Package: flowCHIC 1.47.0
Author: Joachim Schumann
flowCHIC: Analyze flow cytometric data using histogram information
A package to analyze flow cytometric data of complex microbial communities based on histogram images
Authors:
flowCHIC_1.47.0.tar.gz
flowCHIC_1.47.0.zip(r-4.7)flowCHIC_1.47.0.zip(r-4.6)flowCHIC_1.47.0.zip(r-4.5)
flowCHIC_1.47.0.tgz(r-4.6-any)flowCHIC_1.47.0.tgz(r-4.5-any)
flowCHIC_1.47.0.tar.gz(r-4.7-any)flowCHIC_1.47.0.tar.gz(r-4.6-any)
flowCHIC_1.47.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
flowCHIC/json (API)
| # Install 'flowCHIC' in R: |
| install.packages('flowCHIC', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- abiotic_incol - Dataset with abiotic data
- Results_overlaps - Dataset with labels and sums of informative pixels within the overlap area of the FCS files included to the package
- Results_overlaps_incol - Dataset with labels and sums of informative pixels within the overlap area of the second downloadable dataset
- Results_overlaps_mix - Dataset with labels and sums of informative pixels within the overlap area of the first downloadable dataset
- Results_xor - Dataset with labels and intensity values of the FCS files included to the package
- Results_xor_incol - Dataset with labels and intensity values of the second downloadable dataset
- Results_xor_mix - Dataset with labels and intensity values of the first downloadable dataset
On BioConductor:flowCHIC-1.47.0(bioc 3.24)flowCHIC-1.46.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
immunooncologycellbasedassaysclusteringflowcytometrysoftwarevisualization
Last updated from:9959c7c5fd. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 189 | ||
| linux-devel-x86_64 | NOTE | 292 | ||
| source / vignettes | OK | 309 | ||
| linux-release-x86_64 | NOTE | 337 | ||
| macos-release-arm64 | NOTE | 190 | ||
| macos-oldrel-arm64 | NOTE | 182 | ||
| windows-devel | NOTE | 182 | ||
| windows-release | NOTE | 190 | ||
| windows-oldrel | NOTE | 161 | ||
| wasm-release | OK | 154 |
Exports:calculate_overlaps_xorfcs_to_imgimg_subplot_nmds
Dependencies:abindbase64encBHBiobaseBiocGenericsbiocmakebitopsbslibcachemcliclustercpp11cytolibdigestdir.expiryEBImageevaluatefarverfastmapfftwtoolsfilelockflowCorefontawesomefsgenericsggplot2gluegtablehexbinhighrhtmltoolshtmlwidgetsisobandjpegjquerylibjsonliteknitrlabelinglatticelifecyclelocfitMASSMatrixmatrixStatsmemoisemgcvmimenlmepermutepngR6rappdirsRColorBrewerRcppRCurlRhdf5librlangrmarkdownRProtoBufLibS4VectorsS7sassscalestifftinytexvctrsveganviridisLitewithrxfunyaml
