Package: epivizrStandalone 1.33.0
epivizrStandalone: Run Epiviz Interactive Genomic Data Visualization App within R
This package imports the epiviz visualization JavaScript app for genomic data interactive visualization. The 'epivizrServer' package is used to provide a web server running completely within R. This standalone version allows to browse arbitrary genomes through genome annotations provided by Bioconductor packages.
Authors:
epivizrStandalone_1.33.0.tar.gz
epivizrStandalone_1.33.0.zip(r-4.5)epivizrStandalone_1.33.0.zip(r-4.4)epivizrStandalone_1.33.0.zip(r-4.3)
epivizrStandalone_1.33.0.tgz(r-4.4-any)epivizrStandalone_1.33.0.tgz(r-4.3-any)
epivizrStandalone_1.33.0.tar.gz(r-4.5-noble)epivizrStandalone_1.33.0.tar.gz(r-4.4-noble)
epivizrStandalone_1.33.0.tgz(r-4.4-emscripten)epivizrStandalone_1.33.0.tgz(r-4.3-emscripten)
epivizrStandalone.pdf |epivizrStandalone.html✨
epivizrStandalone/json (API)
NEWS
# Install 'epivizrStandalone' in R: |
install.packages('epivizrStandalone', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:epivizrStandalone-1.33.0(bioc 3.20)epivizrStandalone-1.32.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:e65b17d34e
Exports:setStandalonestartStandalonestartStandaloneApp
Dependencies:abindAnnotationDbiAnnotationFilteraskpassBHBiobaseBiocFileCacheBiocGenericsBiocIOBiocManagerBiocParallelbiomaRtBiostringsbitbit64bitopsblobbumphuntercachemclicodetoolscpp11crayoncurlDBIdbplyrDelayedArraydigestdoRNGdplyrensembldbepivizrepivizrDataepivizrServerfansifastmapfilelockforeachformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesgit2rgluegraphhmshttpuvhttrhttr2IRangesiteratorsjsonliteKEGGRESTlambda.rlaterlatticelazyevallifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslOrganismDbipillarpkgconfigplogrpngprettyunitsprogresspromisesProtGenericspurrrR6rappdirsRBGLRcppRCurlrestfulrRhtslibrjsonrlangrngtoolsRsamtoolsRSQLitertracklayerS4ArraysS4VectorssnowSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttxdbmakerUCSC.utilsutf8vctrswithrXMLxml2XVectoryamlzlibbioc
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Set settings for epiviz standalone repository. | setStandalone |
Start a standalone 'epivizr' session. | startStandalone |
Start a standalone 'epivizr' session. | startStandaloneApp |