Package: dupRadar 1.37.0
Sergi Sayols
dupRadar: Assessment of duplication rates in RNA-Seq datasets
Duplication rate quality control for RNA-Seq datasets.
Authors:
dupRadar_1.37.0.tar.gz
dupRadar_1.37.0.zip(r-4.5)dupRadar_1.37.0.zip(r-4.4)dupRadar_1.37.0.zip(r-4.3)
dupRadar_1.37.0.tgz(r-4.4-any)dupRadar_1.37.0.tgz(r-4.3-any)
dupRadar_1.37.0.tar.gz(r-4.5-noble)dupRadar_1.37.0.tar.gz(r-4.4-noble)
dupRadar_1.37.0.tgz(r-4.4-emscripten)dupRadar_1.37.0.tgz(r-4.3-emscripten)
dupRadar.pdf |dupRadar.html✨
dupRadar/json (API)
NEWS
| # Install 'dupRadar' in R: |
| install.packages('dupRadar', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ssayols/dupradar/issues
- dupRadar_examples - Example data containing precomputed matrices for two RNASeq experiments
On BioConductor:dupRadar-1.37.0(bioc 3.21)dupRadar-1.36.0(bioc 3.20)
technologysequencingrnaseqqualitycontrolimmunooncology
Last updated 20 days agofrom:9afe62b26f. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 18 2024 |
| R-4.5-win | NOTE | Nov 18 2024 |
| R-4.5-linux | NOTE | Nov 18 2024 |
| R-4.4-win | NOTE | Nov 18 2024 |
| R-4.4-mac | NOTE | Nov 18 2024 |
| R-4.3-win | NOTE | Nov 18 2024 |
| R-4.3-mac | NOTE | Nov 18 2024 |
Exports:analyzeDupratescumulativeDuprateBarplotduprateExpBoxplotduprateExpDensPlotduprateExpFitduprateExpIdentifyduprateExpPlotexpressionHistgetBinDuplicationgetBinRpkMeangetDupMatBingetDupMatStatsgetDynamicRangegetRpkBinReadCountFractiongetRpkCumulativeReadCountFractionmarkDuplicatesreadcountExpBoxplot
Dependencies:KernSmoothlatticeMatrixRsubread
