Package: diffcoexp 1.33.0

Wenbin Wei

diffcoexp: Differential Co-expression Analysis

A tool for the identification of differentially coexpressed links (DCLs) and differentially coexpressed genes (DCGs). DCLs are gene pairs with significantly different correlation coefficients under two conditions. DCGs are genes with significantly more DCLs than by chance.

Authors:Wenbin Wei, Sandeep Amberkar, Winston Hide

diffcoexp_1.33.0.tar.gz
diffcoexp_1.33.0.zip(r-4.7)diffcoexp_1.33.0.zip(r-4.6)diffcoexp_1.33.0.zip(r-4.5)
diffcoexp_1.33.0.tgz(r-4.6-any)diffcoexp_1.33.0.tgz(r-4.5-any)
diffcoexp_1.33.0.tar.gz(r-4.7-any)diffcoexp_1.33.0.tar.gz(r-4.6-any)
diffcoexp_1.33.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
diffcoexp/json (API)
NEWS

# Install 'diffcoexp' in R:
install.packages('diffcoexp', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hidelab/diffcoexp/issues

Datasets:

On BioConductor:diffcoexp-1.33.0(bioc 3.24)diffcoexp-1.32.0(bioc 3.23)

geneexpressiondifferentialexpressiontranscriptionmicroarrayonechanneltwochannelrnaseqsequencingcoverageimmunooncology

6.94 score 17 stars 37 scripts 437 downloads 2 mentions 3 exports 94 dependencies

Last updated from:aee0eebd99. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR203
linux-devel-x86_64OK357
source / vignettesOK299
linux-release-x86_64OK330
macos-release-arm64OK258
macos-oldrel-arm64OK180
windows-develOK542
windows-releaseOK221
windows-oldrelOK558
wasm-releaseOK178

Exports:coexprcomparecordiffcoexp

Dependencies:abindbackportsbase64encBiobaseBiocGenericsbslibcachemcheckmatecliclustercodetoolscolorspacecpp11data.tableDelayedArrayDiffCorrdigestdoParalleldynamicTreeCutevaluatefarverfastclusterfastmapfdrtoolfontawesomeforeachforeignFormulafsgenericsGenomicRangesggplot2glueGPArotationgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsigraphimputeIRangesisobanditeratorsjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemimemnormtmulttestnlmennetpcaMethodspkgconfigpreprocessCorepsychR6rappdirsRColorBrewerRcpprlangrmarkdownrpartrstudioapiS4ArraysS4VectorsS7sassscalesSeqinfoSparseArraystringistringrSummarizedExperimentsurvivaltinytexvctrsviridisLiteWGCNAwithrxfunXVectoryaml

About diffcoexp

Rendered fromdiffcoexp.Rnwusingutils::Sweaveon May 30 2026.

Last update: 2020-11-23
Started: 2018-01-17