Package: derfinderPlot 1.47.0

Leonardo Collado-Torres

derfinderPlot: Plotting functions for derfinder

This package provides plotting functions for results from the derfinder package. This helps separate the graphical dependencies required for making these plots from the core functionality of derfinder.

Authors:Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]

derfinderPlot_1.47.0.tar.gz
derfinderPlot_1.47.0.zip(r-4.7-any)derfinderPlot_1.47.0.zip(r-4.6-any)derfinderPlot_1.47.0.zip(r-4.5-any)
derfinderPlot_1.47.0.tgz(r-4.6-any)derfinderPlot_1.47.0.tgz(r-4.5-any)
derfinderPlot_1.47.0.tar.gz(r-4.7-any)derfinderPlot_1.47.0.tar.gz(r-4.6-any)
derfinderPlot_1.47.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
derfinderPlot/json (API)

# Install 'derfinderPlot' in R:
install.packages('derfinderPlot', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/leekgroup/derfinderplot/issues

On BioConductor:derfinderPlot-1.47.0(bioc 3.24)derfinderPlot-1.46.0(bioc 3.23)

differentialexpressionsequencingrnaseqsoftwarevisualizationimmunooncologybioconductorderfinder

4.65 score 2 stars 1 packages 9 scripts 864 downloads 1 mentions 4 exports 139 dependencies

Last updated from:3e8a612ad8. Checks:1 NOTE, 8 ERROR, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE235
linux-develERROR488
source / vignettesERROR445
linux-releaseERROR547
macos-releaseERROR435
macos-oldrelERROR412
windows-develERROR523
windows-releaseERROR511
windows-oldrelERROR527
wasm-releaseOK166

Exports:plotClusterplotOverviewplotRegionCoveragevennRegions

Dependencies:abindAnnotationDbiAnnotationFilteraskpassbackportsbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocManagerBiocParallelBiostringsbiovizBasebitbit64bitopsblobBSgenomebslibbumphuntercachemcheckmatecigarillocliclustercodetoolscolorspacecpp11crayoncurldata.tableDBIDelayedArrayderfinderderfinderHelperdichromatdigestdoRNGensembldbevaluatefarverfastmapfontawesomeforeachforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicFilesGenomicRangesggbioggplot2gluegraphgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrIRangesisobanditeratorsjquerylibjsonliteKEGGRESTknitrlabelinglambda.rlatticelazyevallifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimennetopensslOrganismDbipkgconfigplyrpngProtGenericsqvalueR6rappdirsRBGLRColorBrewerRcppRCurlreshape2restfulrRhtslibrjsonrlangrmarkdownrngtoolsrpartRsamtoolsRSQLiterstudioapirtracklayerS4ArraysS4VectorsS7sassscalesSeqinfosnowSparseArraystatmodstringistringrSummarizedExperimentsystinytexUCSC.utilsVariantAnnotationvctrsviridisLitewithrxfunXMLXVectoryaml