Package: derfinderPlot 1.47.0

Leonardo Collado-Torres

derfinderPlot: Plotting functions for derfinder

This package provides plotting functions for results from the derfinder package. This helps separate the graphical dependencies required for making these plots from the core functionality of derfinder.

Authors:Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]

derfinderPlot_1.47.0.tar.gz
derfinderPlot_1.47.0.zip(r-4.7-any)derfinderPlot_1.47.0.zip(r-4.6-any)derfinderPlot_1.47.0.zip(r-4.5-any)
derfinderPlot_1.47.0.tgz(r-4.6-any)derfinderPlot_1.47.0.tgz(r-4.5-any)
derfinderPlot_1.47.0.tar.gz(r-4.7-any)derfinderPlot_1.47.0.tar.gz(r-4.6-any)
derfinderPlot_1.47.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
derfinderPlot/json (API)

# Install 'derfinderPlot' in R:
install.packages('derfinderPlot', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/leekgroup/derfinderplot/issues

On BioConductor:derfinderPlot-1.47.0(bioc 3.24)derfinderPlot-1.46.0(bioc 3.23)

differentialexpressionsequencingrnaseqsoftwarevisualizationimmunooncologybioconductorderfinder

4.30 score 2 stars 9 scripts 710 downloads 1 mentions 4 exports 139 dependencies

Last updated from:3e8a612ad8. Checks:1 NOTE, 8 ERROR, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE285
linux-develERROR663
source / vignettesERROR466
linux-releaseERROR594
macos-releaseERROR523
macos-oldrelERROR509
windows-develERROR523
windows-releaseERROR552
windows-oldrelERROR508
wasm-releaseOK232

Exports:plotClusterplotOverviewplotRegionCoveragevennRegions

Dependencies:abindAnnotationDbiAnnotationFilteraskpassbackportsbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocManagerBiocParallelBiostringsbiovizBasebitbit64bitopsblobBSgenomebslibbumphuntercachemcheckmatecigarillocliclustercodetoolscolorspacecpp11crayoncurldata.tableDBIDelayedArrayderfinderderfinderHelperdichromatdigestdoRNGensembldbevaluatefarverfastmapfontawesomeforeachforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicFilesGenomicRangesggbioggplot2gluegraphgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrIRangesisobanditeratorsjquerylibjsonliteKEGGRESTknitrlabelinglambda.rlatticelazyevallifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimennetopensslOrganismDbipkgconfigplyrpngProtGenericsqvalueR6rappdirsRBGLRColorBrewerRcppRCurlreshape2restfulrRhtslibrjsonrlangrmarkdownrngtoolsrpartRsamtoolsRSQLiterstudioapirtracklayerS4ArraysS4VectorsS7sassscalesSeqinfosnowSparseArraystatmodstringistringrSummarizedExperimentsystinytexUCSC.utilsVariantAnnotationvctrsviridisLitewithrxfunXMLXVectoryaml