Package: customCMPdb 1.17.0

Yuzhu Duan

customCMPdb: Customize and Query Compound Annotation Database

This package serves as a query interface for important community collections of small molecules, while also allowing users to include custom compound collections.

Authors:Yuzhu Duan [aut, cre], Thomas Girke [aut]

customCMPdb_1.17.0.tar.gz
customCMPdb_1.17.0.zip(r-4.5)customCMPdb_1.17.0.zip(r-4.4)customCMPdb_1.17.0.zip(r-4.3)
customCMPdb_1.17.0.tgz(r-4.5-any)customCMPdb_1.17.0.tgz(r-4.4-any)customCMPdb_1.17.0.tgz(r-4.3-any)
customCMPdb_1.17.0.tar.gz(r-4.5-noble)customCMPdb_1.17.0.tar.gz(r-4.4-noble)
customCMPdb_1.17.0.tgz(r-4.4-emscripten)customCMPdb_1.17.0.tgz(r-4.3-emscripten)
customCMPdb.pdf |customCMPdb.html✨
customCMPdb/json (API)
NEWS

# Install 'customCMPdb' in R:
install.packages('customCMPdb', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yduan004/customcmpdb/issues

On BioConductor:customCMPdb-1.17.0(bioc 3.21)customCMPdb-1.16.0(bioc 3.20)

softwarecheminformaticsannotationhubsoftware

4.78 score 2 stars 4 scripts 228 downloads 11 exports 103 dependencies

Last updated 4 months agofrom:c0072d48e6. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 17 2025
R-4.5-winOKFeb 17 2025
R-4.5-macOKFeb 17 2025
R-4.5-linuxOKFeb 17 2025
R-4.4-winOKFeb 17 2025
R-4.4-macOKFeb 17 2025
R-4.3-winOKFeb 17 2025
R-4.3-macOKFeb 17 2025

Exports:addCustomAnnotbuildDrugAgeDBdbxml2dfdefaultAnnotdeleteAnnotdf2SQLitelistAnnotloadAnnotloadSDFwithNameprocessDrugagequeryAnnotDB

Dependencies:AnnotationDbiAnnotationHubaskpassbase64encBHBiobaseBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64bitopsblobbslibcachemChemmineRclicolorspacecpp11crayoncrosstalkcurlDBIdbplyrdigestdplyrDTevaluatefansifarverfastmapfilelockfontawesomefsgenericsGenomeInfoDbGenomeInfoDbDataggplot2gluegridExtragtablehighrhtmltoolshtmlwidgetshttpuvhttrIRangesisobandjquerylibjsonliteKEGGRESTknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplogrpngpromisespurrrR6rappdirsRColorBrewerRcppRCurlrjsonrlangrmarkdownRSQLitersvgS4VectorssassscalesstringistringrsystibbletidyrtidyselecttinytexUCSC.utilsutf8vctrsviridisLitewithrxfunXMLXVectoryaml

customCMPdb: Integrating Community and Custom Compound Collections

Authors: Yuzhu Duan, Dan Evans, Kevin Horan, Austin Leong, Siddharth Sai and Thomas Girke

Rendered fromcustomCMPdb.Rmdusingknitr::rmarkdownon Feb 17 2025.

Last update: 2022-02-01
Started: 2020-10-01