Package: ctc 1.81.0
Antoine Lucas
ctc: Cluster and Tree Conversion.
Tools for export and import classification trees and clusters to other programs
Authors:
ctc_1.81.0.tar.gz
ctc_1.81.0.zip(r-4.5)ctc_1.81.0.zip(r-4.4)ctc_1.81.0.zip(r-4.3)
ctc_1.81.0.tgz(r-4.4-any)ctc_1.81.0.tgz(r-4.3-any)
ctc_1.81.0.tar.gz(r-4.5-noble)ctc_1.81.0.tar.gz(r-4.4-noble)
ctc_1.81.0.tgz(r-4.4-emscripten)ctc_1.81.0.tgz(r-4.3-emscripten)
ctc.pdf |ctc.html✨
ctc/json (API)
| # Install 'ctc' in R: |
| install.packages('ctc', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ctc-1.79.0(bioc 3.20)ctc-1.78.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
microarrayclusteringclassificationdataimportvisualization
Last updated 23 days agofrom:d5fd1b90af. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win | NOTE | Oct 30 2024 |
| R-4.5-linux | NOTE | Oct 30 2024 |
| R-4.4-win | NOTE | Oct 30 2024 |
| R-4.4-mac | NOTE | Oct 30 2024 |
| R-4.3-win | NOTE | Oct 30 2024 |
| R-4.3-mac | NOTE | Oct 30 2024 |
Exports:hc2Newickhclust2treeviewr2atrr2cdtr2clusterr2gtrr2xclusterread.eisenxclusterxcluster2r
Dependencies:amap
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Convert hclust objects to Newick format files | hc2Newick |
| Hierarchical clustering and treeview export | hclust2treeview |
| Write to Cluster file format | r2cluster |
| Write to gtr, atr, cdt file format | r2atr r2cdt r2gtr |
| Write to Xcluster file format | r2xcluster |
| Read expression data from a file formatted for Eisen clustering | read.eisen |
| Hierarchical clustering | xcluster |
| Importing Xcluster/Cluster output | xcluster2r |
