Package: ctc 1.87.0
Antoine Lucas
ctc: Cluster and Tree Conversion.
Tools for export and import classification trees and clusters to other programs
Authors:
ctc_1.87.0.tar.gz
ctc_1.87.0.zip(r-4.7)ctc_1.87.0.zip(r-4.6)ctc_1.87.0.zip(r-4.5)
ctc_1.87.0.tgz(r-4.6-any)ctc_1.87.0.tgz(r-4.5-any)
ctc_1.87.0.tar.gz(r-4.7-any)ctc_1.87.0.tar.gz(r-4.6-any)
ctc_1.87.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ctc/json (API)
| # Install 'ctc' in R: |
| install.packages('ctc', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ctc-1.87.0(bioc 3.24)ctc-1.86.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
microarrayclusteringclassificationdataimportvisualization
Last updated from:281413daa6. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 127 | ||
| linux-devel-x86_64 | NOTE | 115 | ||
| source / vignettes | OK | 165 | ||
| linux-release-x86_64 | NOTE | 161 | ||
| macos-release-arm64 | NOTE | 87 | ||
| macos-oldrel-arm64 | NOTE | 95 | ||
| windows-devel | NOTE | 65 | ||
| windows-release | NOTE | 71 | ||
| windows-oldrel | NOTE | 67 | ||
| wasm-release | OK | 87 |
Exports:hc2Newickhclust2treeviewr2atrr2cdtr2clusterr2gtrr2xclusterread.eisenxclusterxcluster2r
Dependencies:amap
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Convert hclust objects to Newick format files | hc2Newick |
| Hierarchical clustering and treeview export | hclust2treeview |
| Write to Cluster file format | r2cluster |
| Write to gtr, atr, cdt file format | r2atr r2cdt r2gtr |
| Write to Xcluster file format | r2xcluster |
| Read expression data from a file formatted for Eisen clustering | read.eisen |
| Hierarchical clustering | xcluster |
| Importing Xcluster/Cluster output | xcluster2r |
