Package: clusterStab 1.85.0
James W. MacDonald
clusterStab: Compute cluster stability scores for microarray data
This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.
Authors:
clusterStab_1.85.0.tar.gz
clusterStab_1.85.0.zip(r-4.7)clusterStab_1.85.0.zip(r-4.6)clusterStab_1.85.0.zip(r-4.5)
clusterStab_1.85.0.tgz(r-4.6-any)clusterStab_1.85.0.tgz(r-4.5-any)
clusterStab_1.85.0.tar.gz(r-4.7-any)clusterStab_1.85.0.tar.gz(r-4.6-any)
clusterStab_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
clusterStab/json (API)
| # Install 'clusterStab' in R: |
| install.packages('clusterStab', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:clusterStab-1.85.0(bioc 3.24)clusterStab-1.84.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:98757d6792. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 133 | ||
| linux-devel-x86_64 | NOTE | 154 | ||
| source / vignettes | OK | 158 | ||
| linux-release-x86_64 | NOTE | 136 | ||
| macos-release-arm64 | NOTE | 117 | ||
| macos-oldrel-arm64 | NOTE | 98 | ||
| windows-devel | NOTE | 92 | ||
| windows-release | NOTE | 78 | ||
| windows-oldrel | NOTE | 81 | ||
| wasm-release | OK | 99 |
Exports:benhurclusterCompecdfhist
Dependencies:BiobaseBiocGenericsgenerics
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| A Function to Estimate the Number of Clusters in Microarray Data | benhur benhur,ExpressionSet-method benhur,matrix-method benhur-methods do.benhur |
| Class "BenHur", a class for estimating clusters in microarray data, and methods for visualizing them. | BenHur-class ecdf,BenHur-method hist,BenHur-method show,BenHur-method |
| Estimate Microarray Cluster Stability | clusterComp clusterComp,ExpressionSet-method clusterComp,matrix-method clusterComp-methods do.clusterComp |
| Class "ClusterComp" a class for testing the stability of clusters in microarray data | ClusterComp-class show,ClusterComp-method |
