Package: clusterStab 1.79.0

James W. MacDonald

clusterStab: Compute cluster stability scores for microarray data

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Authors:James W. MacDonald, Debashis Ghosh, Mark Smolkin

clusterStab_1.79.0.tar.gz
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clusterStab.pdf |clusterStab.html✨
clusterStab/json (API)

# Install 'clusterStab' in R:
install.packages('clusterStab', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:clusterStab-1.79.0(bioc 3.21)clusterStab-1.78.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

clustering

3.90 score 2 scripts 314 downloads 4 mentions 4 exports 3 dependencies

Last updated 23 days agofrom:a43a209052. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 18 2024
R-4.5-winNOTENov 18 2024
R-4.5-linuxNOTENov 18 2024
R-4.4-winNOTENov 18 2024
R-4.4-macNOTENov 18 2024
R-4.3-winNOTENov 18 2024
R-4.3-macNOTENov 18 2024

Exports:benhurclusterCompecdfhist

Dependencies:BiobaseBiocGenericsgenerics

clusterStab Overview

Rendered fromclusterStab.Rnwusingutils::Sweaveon Nov 18 2024.

Last update: 2013-10-21
Started: 2013-10-21

Readme and manuals

Help Manual

Help pageTopics
A Function to Estimate the Number of Clusters in Microarray Databenhur benhur,ExpressionSet-method benhur,matrix-method benhur-methods do.benhur
Class "BenHur", a class for estimating clusters in microarray data, and methods for visualizing them.BenHur-class ecdf,BenHur-method hist,BenHur-method show,BenHur-method
Estimate Microarray Cluster StabilityclusterComp clusterComp,ExpressionSet-method clusterComp,matrix-method clusterComp-methods do.clusterComp
Class "ClusterComp" a class for testing the stability of clusters in microarray dataClusterComp-class show,ClusterComp-method