Package: clst 1.61.0
clst: Classification by local similarity threshold
Package for modified nearest-neighbor classification based on calculation of a similarity threshold distinguishing within-group from between-group comparisons.
Authors:
clst_1.61.0.tar.gz
clst_1.61.0.zip(r-4.7)clst_1.61.0.zip(r-4.6)clst_1.61.0.zip(r-4.5)
clst_1.61.0.tgz(r-4.6-any)clst_1.61.0.tgz(r-4.5-any)
clst_1.61.0.tar.gz(r-4.7-any)clst_1.61.0.tar.gz(r-4.6-any)
clst_1.61.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
clst/json (API)
| # Install 'clst' in R: |
| install.packages('clst', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:clst-1.61.0(bioc 3.24)clst-1.60.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:7a1f4ef3de. Checks:1 ERROR, 7 WARNING, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 130 | ||
| linux-devel-x86_64 | WARNING | 156 | ||
| source / vignettes | OK | 143 | ||
| linux-release-x86_64 | WARNING | 152 | ||
| macos-release-arm64 | WARNING | 90 | ||
| macos-oldrel-arm64 | WARNING | 83 | ||
| windows-devel | WARNING | 74 | ||
| windows-release | WARNING | 68 | ||
| windows-oldrel | WARNING | 65 | ||
| wasm-release | OK | 94 |
Exports:classifierclassifyclassifyIterfindThresholdpartitionplotDistancesplotMutinfoprintClstpullpullTabscaleDistPlot
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Classification by local similarity threshold | clst-package clst |
| Actinomyces data set | actino |
| BV reference set. | bvseqs |
| classify | classifier classify classifyIter pull pullTab |
| findThreshold | findThreshold partition |
| Visualize results of 'link{findThreshold}' | plotDistances plotMutinfo |
| Print a summary of the classifier output. | printClst |
| Annotated multidimensional scaling plots. | scaleDistPlot |
| Streptococcus data set. | strep |
