Package: clst 1.55.0
Noah Hoffman
clst: Classification by local similarity threshold
Package for modified nearest-neighbor classification based on calculation of a similarity threshold distinguishing within-group from between-group comparisons.
Authors:
clst_1.55.0.tar.gz
clst_1.55.0.zip(r-4.5)clst_1.55.0.zip(r-4.4)clst_1.55.0.zip(r-4.3)
clst_1.55.0.tgz(r-4.5-any)clst_1.55.0.tgz(r-4.4-any)clst_1.55.0.tgz(r-4.3-any)
clst_1.55.0.tar.gz(r-4.5-noble)clst_1.55.0.tar.gz(r-4.4-noble)
clst_1.55.0.tgz(r-4.4-emscripten)clst_1.55.0.tgz(r-4.3-emscripten)
clst.pdf |clst.html✨
clst/json (API)
| # Install 'clst' in R: |
| install.packages('clst', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:clst-1.55.0(bioc 3.21)clst-1.54.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 months agofrom:b7497fcb3a. Checks:1 OK, 7 WARNING. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 28 2025 |
| R-4.5-win | WARNING | Jan 28 2025 |
| R-4.5-mac | WARNING | Jan 28 2025 |
| R-4.5-linux | WARNING | Jan 28 2025 |
| R-4.4-win | WARNING | Jan 28 2025 |
| R-4.4-mac | WARNING | Jan 28 2025 |
| R-4.3-win | WARNING | Jan 28 2025 |
| R-4.3-mac | WARNING | Jan 28 2025 |
Exports:classifierclassifyclassifyIterfindThresholdpartitionplotDistancesplotMutinfoprintClstpullpullTabscaleDistPlot
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Classification by local similarity threshold | clst-package clst |
| Actinomyces data set | actino |
| BV reference set. | bvseqs |
| classify | classifier classify classifyIter pull pullTab |
| findThreshold | findThreshold partition |
| Visualize results of 'link{findThreshold}' | plotDistances plotMutinfo |
| Print a summary of the classifier output. | printClst |
| Annotated multidimensional scaling plots. | scaleDistPlot |
| Streptococcus data set. | strep |
