Package: cliProfiler 1.11.0

You Zhou

cliProfiler: A package for the CLIP data visualization

An easy and fast way to visualize and profile the high-throughput IP data. This package generates the meta gene profile and other profiles. These profiles could provide valuable information for understanding the IP experiment results.

Authors:You Zhou [aut, cre], Kathi Zarnack [aut]

cliProfiler_1.11.0.tar.gz
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cliProfiler_1.11.0.tgz(r-4.4-any)cliProfiler_1.11.0.tgz(r-4.3-any)
cliProfiler_1.11.0.tar.gz(r-4.5-noble)cliProfiler_1.11.0.tar.gz(r-4.4-noble)
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cliProfiler.pdf |cliProfiler.html✨
cliProfiler/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/codezy99/cliprofiler/issues

On BioConductor:cliProfiler-1.11.0(bioc 3.20)cliProfiler-1.10.0(bioc 3.19)

bioconductor-package

7 exports 0.49 score 78 dependencies

Last updated 2 months agofrom:08b502ba6e

Exports:exonProfilegeneTypeProfileintronProfilemetaGeneProfilemotifProfilespliceSiteProfilewindowProfile

Dependencies:abindaskpassBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitopsBSgenomeclicodetoolscolorspacecpp11crayoncurlDelayedArraydplyrfansifarverformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2gluegtablehttrIRangesisobandjsonlitelabelinglambda.rlatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigR6RColorBrewerRCurlrestfulrRhtslibrjsonrlangRsamtoolsrtracklayerS4ArraysS4VectorsscalessnowSparseArraySummarizedExperimentsystibbletidyselectUCSC.utilsutf8vctrsviridisLitewithrXMLXVectoryamlzlibbioc