Package: cliProfiler 1.19.0

You Zhou

cliProfiler: A package for the CLIP data visualization

An easy and fast way to visualize and profile the high-throughput IP data. This package generates the meta gene profile and other profiles. These profiles could provide valuable information for understanding the IP experiment results.

Authors:You Zhou [aut, cre], Kathi Zarnack [aut]

cliProfiler_1.19.0.tar.gz
cliProfiler_1.19.0.zip(r-4.7)cliProfiler_1.19.0.zip(r-4.6)cliProfiler_1.19.0.zip(r-4.5)
cliProfiler_1.19.0.tgz(r-4.6-any)cliProfiler_1.19.0.tgz(r-4.5-any)
cliProfiler_1.19.0.tar.gz(r-4.7-any)cliProfiler_1.19.0.tar.gz(r-4.6-any)
cliProfiler_1.19.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
cliProfiler/json (API)
NEWS

# Install 'cliProfiler' in R:
install.packages('cliProfiler', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/codezy99/cliprofiler/issues

On BioConductor:cliProfiler-1.19.0(bioc 3.24)cliProfiler-1.18.0(bioc 3.23)

sequencingchipseqvisualizationepigeneticsgenetics

4.26 score 18 scripts 278 downloads 7 exports 72 dependencies

Last updated from:6ac0d99c28. Checks:1 NOTE, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE241
linux-devel-x86_64OK416
source / vignettesOK330
linux-release-x86_64OK471
macos-release-arm64OK352
macos-oldrel-arm64OK232
windows-develOK339
windows-releaseOK375
windows-oldrelOK350
wasm-releaseOK195

Exports:exonProfilegeneTypeProfileintronProfilemetaGeneProfilemotifProfilespliceSiteProfilewindowProfile

Dependencies:abindaskpassBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocParallelBiostringsbitopsBSgenomecigarilloclicodetoolscpp11crayoncurlDelayedArraydplyrfarverformatRfutile.loggerfutile.optionsgenericsGenomicAlignmentsGenomicRangesggplot2gluegtablehttrIRangesisobandjsonlitelabelinglambda.rlatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmimeopensslpillarpkgconfigR6RColorBrewerRCurlrestfulrRhtslibrjsonrlangRsamtoolsrtracklayerS4ArraysS4VectorsS7scalesSeqinfosnowSparseArraySummarizedExperimentsystibbletidyselectutf8vctrsviridisLitewithrXMLXVectoryaml

cliProfiler Vignettes

You Zhou, Kathi Zarnack

Rendered fromcliProfilerIntroduction.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2021-10-13
Started: 2021-06-16