Package: cleaver 1.45.0

Sebastian Gibb

cleaver: Cleavage of Polypeptide Sequences

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Authors:Sebastian Gibb [aut, cre]

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NEWS

# Install 'cleaver' in R:
install.packages('cleaver', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/sgibb/cleaver/issues

On BioConductor:cleaver-1.45.0(bioc 3.21)cleaver-1.44.0(bioc 3.20)

proteomicsbioccleavagedigestpeptides

7.58 score 12 stars 2 packages 22 scripts 424 downloads 2 mentions 3 exports 19 dependencies

Last updated 2 months agofrom:739ea765fe. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 27 2024
R-4.5-winNOTENov 27 2024
R-4.5-linuxNOTENov 27 2024
R-4.4-winNOTENov 27 2024
R-4.4-macNOTENov 27 2024
R-4.3-winNOTENov 27 2024
R-4.3-macNOTENov 27 2024

Exports:cleavageRangescleavageSitescleave

Dependencies:askpassBiocGenericsBiostringscrayoncurlgenericsGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitemimeopensslR6S4VectorssysUCSC.utilsXVectorzlibbioc

In-silico cleavage of polypeptides using the cleaver package

Rendered fromcleaver.Rmdusingknitr::rmarkdownon Nov 27 2024.

Last update: 2022-08-31
Started: 2018-11-03

Readme and manuals

Help Manual

Help pageTopics
Cleavage of polypeptide sequencescleaver-package
Cleavage of polypeptide sequencescleavageRanges cleavageRanges,AAString-method cleavageRanges,AAStringSet-method cleavageRanges,character-method cleavageSites cleavageSites,AAString-method cleavageSites,AAStringSet-method cleavageSites,character-method cleave cleave,AAString-method cleave,AAStringSet-method cleave,character-method