Package: cisPath 1.47.0
Likun Wang
cisPath: Visualization and management of the protein-protein interaction networks.
cisPath is an R package that uses web browsers to visualize and manage protein-protein interaction networks.
Authors:
cisPath_1.47.0.tar.gz
cisPath_1.47.0.zip(r-4.5)cisPath_1.47.0.zip(r-4.4)cisPath_1.47.0.zip(r-4.3)
cisPath_1.47.0.tgz(r-4.4-x86_64)cisPath_1.47.0.tgz(r-4.4-arm64)cisPath_1.47.0.tgz(r-4.3-x86_64)cisPath_1.47.0.tgz(r-4.3-arm64)
cisPath_1.47.0.tar.gz(r-4.5-noble)cisPath_1.47.0.tar.gz(r-4.4-noble)
cisPath_1.47.0.tgz(r-4.4-emscripten)cisPath_1.47.0.tgz(r-4.3-emscripten)
cisPath.pdf |cisPath.html✨
cisPath/json (API)
NEWS
| # Install 'cisPath' in R: |
| install.packages('cisPath', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:cisPath-1.45.0(bioc 3.20)cisPath-1.44.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 26 days agofrom:7d721c8e4e. Checks:OK: 1 WARNING: 5 NOTE: 3. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.5-linux-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.4-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-mac-aarch64 | WARNING | Oct 30 2024 |
| R-4.3-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.3-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.3-mac-aarch64 | WARNING | Oct 30 2024 |
Exports:cisPathcombinePPIeasyEditorformatiRefIndexformatPINAPPIformatSIFfileformatSTRINGPPIgetMappingFilenetworkView
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Visualization of the shortest paths of functional interaction between proteins | cisPath cisPath,character,character-method |
| Combine PPI information from databases | combinePPI combinePPI,character,character-method |
| Easy editor for network graphs | easyEditor easyEditor,character-method |
| Format PPI files downloaded from the iRefIndex database | formatiRefIndex formatiRefIndex,character,character-method |
| Format PPI files downloaded from the PINA database (MITAB Format) | formatPINAPPI formatPINAPPI,character,character-method |
| Format PPI file downloaded from the PINA2 database (SIF Format) | formatSIFfile formatSIFfile,character,character,character-method |
| Format PPI file downloaded from the STRING database | formatSTRINGPPI formatSTRINGPPI,character,character,character,character-method |
| Generate the identifier mapping file | getMappingFile getMappingFile,character,character-method |
| Visualization of the interactions between input proteins | networkView networkView,character,character,character-method |