Package: ccmap 1.31.0

Alex Pickering

ccmap: Combination Connectivity Mapping

Finds drugs and drug combinations that are predicted to reverse or mimic gene expression signatures. These drugs might reverse diseases or mimic healthy lifestyles.

Authors:Alex Pickering

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ccmap.pdf |ccmap.html
ccmap/json (API)

# Install 'ccmap' in R:
install.packages('ccmap', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:ccmap-1.31.0(bioc 3.20)ccmap-1.30.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 0.91 score 50 dependencies

Last updated 2 months agofrom:ee4b549784

Exports:get_dprimesquery_combosquery_drugssum_rowcolCumsum

Dependencies:AnnotationDbiaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemccdataclicodetoolscpp11crayoncurldata.tableDBIdoParallelfastmapforeachGenomeInfoDbGenomeInfoDbDatagluehttrIRangesiteratorsjsonliteKEGGRESTlatticelifecyclelsaMatrixmemoisemimeopensslpkgconfigplogrpngR6rlangRSQLiteS4VectorsSnowballCsysUCSC.utilsvctrsxgboostXVectorzlibbioc

Combination Connectivity Mapping

Rendered fromccmap-vignette.Rmdusingknitr::rmarkdownon Jul 05 2024.

Last update: 2017-04-04
Started: 2016-06-23