Package: calm 1.19.0

Kun Liang

calm: Covariate Assisted Large-scale Multiple testing

Statistical methods for multiple testing with covariate information. Traditional multiple testing methods only consider a list of test statistics, such as p-values. Our methods incorporate the auxiliary information, such as the lengths of gene coding regions or the minor allele frequencies of SNPs, to improve power.

Authors:Kun Liang [aut, cre]

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calm.pdf |calm.html✨
calm/json (API)
NEWS

# Install 'calm' in R:
install.packages('calm', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/k22liang/calm/issues

Datasets:
  • pso - Psoriasis RNA-seq dataset

On BioConductor:calm-1.19.0(bioc 3.20)calm-1.18.0(bioc 3.19)

bioconductor-package

3 exports 0.49 score 4 dependencies

Last updated 2 months agofrom:9e2801656a

Exports:CLfdrEstFDREstNullProp_RB

Dependencies:latticeMatrixmgcvnlme

Introduction to calm

Kun Liang

Rendered fromcalm_intro.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2019-08-27
Started: 2019-07-24