Package: adductomicsR 1.23.0
adductomicsR: Processing of adductomic mass spectral datasets
Processes MS2 data to identify potentially adducted peptides from spectra that has been corrected for mass drift and retention time drift and quantifies MS1 level mass spectral peaks.
Authors:
adductomicsR_1.23.0.tar.gz
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adductomicsR.pdf |adductomicsR.html✨
adductomicsR/json (API)
# Install 'adductomicsR' in R: |
install.packages('adductomicsR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/josielhayes/adductomicsr/issues
On BioConductor:adductomicsR-1.23.0(bioc 3.21)adductomicsR-1.22.0(bioc 3.20)
massspectrometrymetabolomicssoftwarethirdpartyclientdataimportgui
Last updated 5 months agofrom:3c1217cfeb. Checks:1 OK, 8 WARNING. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Mar 29 2025 |
R-4.5-win | WARNING | Mar 29 2025 |
R-4.5-mac | WARNING | Mar 29 2025 |
R-4.5-linux | WARNING | Mar 29 2025 |
R-4.4-win | WARNING | Mar 29 2025 |
R-4.4-mac | WARNING | Mar 29 2025 |
R-4.4-linux | WARNING | Mar 29 2025 |
R-4.3-win | WARNING | Mar 29 2025 |
R-4.3-mac | WARNING | Mar 29 2025 |
Exports:adductQuantdigestModfilterAdductTablefindPeaksgenerateTargTableIsotopicDistributionModloessWrapperModoutputPeakTablertDevModellingspecSimPepId
Dependencies:adductDataade4AnnotationDbiAnnotationHubaskpassbase64encBiobaseBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobbootbootstrapbslibcachemclasscliclustercodetoolscpp11crayoncrosstalkcurldata.tableDBIdbplyrDEoptimRdigestdiptestdoSNOWdplyrDTevaluateExperimentHubfansifastclusterfastmapfilelockflexmixfontawesomeforeachfpcfsgenericsGenomeInfoDbGenomeInfoDbDatagluehighrhtmltoolshtmlwidgetshttpuvhttrIRangesiteratorsjquerylibjsonliteKEGGRESTkernlabknitrlaterlatticelazyevallifecyclemagrittrMASSmclustmemoisemimemodeltoolsmzRncdf4nnetopensslOrgMassSpecRpastecspillarpixmappkgconfigplogrplyrpngprabcluspracmapromisesProtGenericspurrrR6rappdirsRcppRcppArmadilloRcppEigenreshape2Rhdf5librlangrmarkdownrobustbaseRSQLitervestS4VectorssassselectrsmoothersnowspstringistringrsystibbletidyrtidyselecttinytexTTRUCSC.utilsutf8vctrswithrxfunxml2xtsXVectoryamlzoo