Package: adSplit 1.75.0

Claudio Lottaz

adSplit: Annotation-Driven Clustering

This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.

Authors:Claudio Lottaz, Joern Toedling

adSplit_1.75.0.tar.gz
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adSplit.pdf |adSplit.html✨
adSplit/json (API)

# Install 'adSplit' in R:
install.packages('adSplit', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On BioConductor:adSplit-1.75.0(bioc 3.20)adSplit-1.74.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 0.82 score 45 dependencies

Last updated 2 months agofrom:6b17e85312

Exports:adSplitdiana2meansdrawRandomPSmakeEID2PROBESenvrandomDiana2means

Dependencies:AnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemcliclustercpp11crayoncurlDBIfastmapGenomeInfoDbGenomeInfoDbDataglueGO.dbhttrIRangesjsonliteKEGGRESTlatticelifecycleMASSMatrixmemoisemimemulttestopensslpkgconfigplogrpngR6rlangRSQLiteS4VectorssurvivalsysUCSC.utilsvctrsXVectorzlibbioc

Annotation-Driven Clustering

Rendered fromtr_2005_02.Rnwusingutils::Sweaveon Jul 03 2024.

Last update: 2013-11-01
Started: 2013-11-01